Miyakogusa Predicted Gene
- Lj5g3v2065190.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2065190.1 Non Chatacterized Hit- tr|I1LEC4|I1LEC4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.55329
PE,96.67,0,Tubulin/FtsZ family, GTPase domain,Tubulin/FtsZ, GTPase
domain; Tubulin/FtsZ family, C-terminal doma,CUFF.56654.1
(1353 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62930 homologue to UniRef100_A9PL19 Cluster: Alpha-tu... 2658 0.0
gnl|LJGI|TC63835 homologue to UniRef100_Q2TFP2 Cluster: Tubulin ... 391 e-108
gnl|LJGI|TC72482 UniRef100_A9PL18 Cluster: Alpha-tubulin; n=2; G... 210 2e-53
gnl|LJGI|AV771708 similar to UniRef100_A9PL19 Cluster: Alpha-tub... 188 6e-47
gnl|LJGI|TC81473 homologue to UniRef100_Q5G277 Cluster: Alpha-tu... 131 1e-29
gnl|LJGI|TC79990 homologue to UniRef100_A8DS92 Cluster: Alpha-tu... 62 1e-08
gnl|LJGI|BW614646 homologue to UniRef100_Q2TFP2 Cluster: Tubulin... 54 2e-06
gnl|LJGI|TC77833 homologue to UniRef100_Q2TFP2 Cluster: Tubulin ... 54 2e-06
gnl|LJGI|TC72252 homologue to UniRef100_Q2TFP2 Cluster: Tubulin ... 54 2e-06
>gnl|LJGI|TC62930 homologue to UniRef100_A9PL19 Cluster: Alpha-tubulin; n=2; Gossypium
hirsutum|Rep: Alpha-tubulin - Gossypium hirsutum (Upland
cotton) (Gossypium mexicanum), complete
Length = 1918
Score = 2658 bits (1341), Expect = 0.0
Identities = 1350/1353 (99%)
Strand = Plus / Plus
Query: 1 atgagggagtgcatctcagttcacattggtcaggccggtattcaagtcggaaatgcctgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 atgagggagtgcatctcagttcacattggtcaggccggtattcaagtcggaaatgcctgt 295
Query: 61 tgggagctctactgtcttgagcatggaatcgggcctgatggccaaatgccaagtgacaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 tgggagctctactgtcttgagcatggaatcgggcctgatggccaaatgccaagtgacaag 355
Query: 121 actgtaggcggtggtgatgatgcattcaacactttcttcagcgagactggtgctggaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 actgtaggcggtggtgatgatgcattcaacactttcttcagcgagactggtgctggaaag 415
Query: 181 catgtccctcgtgctgtctttgtggatcttgagcccaccgtgattgatgaggtgaggact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 catgtccctcgtgctgtctttgtggatcttgagcccaccgtgattgatgaggtgaggact 475
Query: 241 ggaacttaccgccagctcttccacccggagcagctgatcagtgggaaagaagatgctgcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 ggaacttaccgccagctcttccacccggagcagctgatcagtgggaaagaagatgctgcc 535
Query: 301 aacaactttgcccgtggtcattataccattgggaaagagatcgttgatctgtgtttggac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 aacaactttgcccgtggtcattataccattgggaaagagatcgttgatctgtgtttggac 595
Query: 361 cgcatcagaaagctggctgacaactgcactggtctgcaagggttcttggtcttcaatgct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 cgcatcagaaagctggctgacaactgcactggtctgcaagggttcttggtcttcaatgct 655
Query: 421 gttggtggaggaactggttctgggcttggttcccttctgttggagcgtctctctgttgat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 gttggtggaggaactggttctgggcttggttcccttctgttggagcgtctctctgttgat 715
Query: 481 tatggcaagaaatcgaagctcgggttcactgtgtatccctctcctcaggtgtccacctcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 tatggcaagaaatcgaagctcgggttcactgtgtatccctctcctcaggtgtccacctcc 775
Query: 541 gttgtggagccatacaacagtgtcctctctacccactccctcttggagcacactgatgtt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 gttgtggagccatacaacagtgtcctctctacccactccctcttggagcacactgatgtt 835
Query: 601 gctgttcttctggacaatgaagccatttatgccatttgtaggcgctcccttgccattgag 660
||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 836 gctgttcttctggacaatgaagccatttatgacatttgtaggcgctcccttgacattgag 895
Query: 661 cgtcccacctacaccaacctccaccgtctcatttctcaggtgatctcttccttgactgct 720
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 896 cgtcccacctacaccaacctcaaccgtctcatttctcaggtgatctcttccttgactgct 955
Query: 721 tctctgagatttgatggtgccctcaatgtggatgtcactgaattccagaccaatttggtt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 956 tctctgagatttgatggtgccctcaatgtggatgtcactgaattccagaccaatttggtt 1015
Query: 781 ccttatcccaggatccattttatgctttcctcgtatgctccagtaatctctgctgagaag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1016 ccttatcccaggatccattttatgctttcctcgtatgctccagtaatctctgctgagaag 1075
Query: 841 gcttaccatgagcagctttcggtggcggaaatcaccaacagtgcatttgagccatcatcc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1076 gcttaccatgagcagctttcggtggcggaaatcaccaacagtgcatttgagccatcatcc 1135
Query: 901 atgatggccaagtgtgaccctcgccacggaaagtacatggcgtgttgtctgatgtaccgt 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1136 atgatggccaagtgtgaccctcgccacggaaagtacatggcgtgttgtctgatgtaccgt 1195
Query: 961 ggtgatgttgtgcccaaagatgtgaatgctgctgttggctccatcaaaaccaagagaacc 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1196 ggtgatgttgtgcccaaagatgtgaatgctgctgttggctccatcaaaaccaagagaacc 1255
Query: 1021 attcagtttgtagattggtgccctactggtttcaaatgcggtatcaactatcagccaccc 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1256 attcagtttgtagattggtgccctactggtttcaaatgcggtatcaactatcagccaccc 1315
Query: 1081 actgttgttccgggtggtgaccttgcaaaggtgcagagggcagtttgcatgatttcaaac 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1316 actgttgttccgggtggtgaccttgcaaaggtgcagagggcagtttgcatgatttcaaac 1375
Query: 1141 tccaccagtgttgccgaggtgttcagtcgtattgatgtaaagtttgatctcatgtattcc 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1376 tccaccagtgttgccgaggtgttcagtcgtattgatgtaaagtttgatctcatgtattcc 1435
Query: 1201 aagcgtgcctttgtccactggtacgtgggtgagggtatggaagaaggtgaattttctgaa 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1436 aagcgtgcctttgtccactggtacgtgggtgagggtatggaagaaggtgaattttctgaa 1495
Query: 1261 gctcgtgaagatcttgctgctcttgaaaaggattatgaagaagtgggtgctgagtccggt 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1496 gctcgtgaagatcttgctgctcttgaaaaggattatgaagaagtgggtgctgagtccggt 1555
Query: 1321 gagggtggggatgacgatattgaggactactag 1353
|||||||||||||||||||||||||||||||||
Sbjct: 1556 gagggtggggatgacgatattgaggactactag 1588
>gnl|LJGI|TC63835 homologue to UniRef100_Q2TFP2 Cluster: Tubulin A; n=1; Glycine
max|Rep: Tubulin A - Glycine max (Soybean), complete
Length = 1711
Score = 391 bits (197), Expect = e-108
Identities = 677/837 (80%)
Strand = Plus / Plus
Query: 478 gattatggcaagaaatcgaagctcgggttcactgtgtatccctctcctcaggtgtccacc 537
||||| ||||||||||| || || || ||||| | || || || |||||||| |||||
Sbjct: 582 gattacggcaagaaatccaaactaggtttcaccatctacccttcccctcaggtttccacg 641
Query: 538 tccgttgtggagccatacaacagtgtcctctctacccactccctcttggagcacactgat 597
| ||||||||||| |||||||| || ||||| || || || ||| | ||||||||||||
Sbjct: 642 gcggttgtggagccttacaacagcgttctctcgacgcattcgctccttgagcacactgat 701
Query: 598 gttgctgttcttctggacaatgaagccatttatgccatttgtaggcgctcccttgccatt 657
|| ||||| || ||||||||||||| || |||| |||||| ||| | || |||| |||
Sbjct: 702 gtggctgtgctgttggacaatgaagcgatctatgacatttgcaggagatctcttgatatt 761
Query: 658 gagcgtcccacctacaccaacctccaccgtctcatttctcaggtgatctcttccttgact 717
||| | || || ||||| ||| | || | || || |||||| | || || || ||||||
Sbjct: 762 gagaggcctacgtacacgaacttgaacaggcttatctctcagatcatttcctcattgact 821
Query: 718 gcttctctgagatttgatggtgccctcaatgtggatgtcactgaattccagaccaatttg 777
| ||| |||| ||||||||||| ||||||| ||| ||||||| || ||||| || |
Sbjct: 822 acctctttgaggtttgatggtgcgatcaatgtagatatcactgagtttcagactaacctt 881
Query: 778 gttccttatcccaggatccattttatgctttcctcgtatgctccagtaatctctgctgag 837
|| |||||||| | |||||||| |||||||| || ||||| || || ||||||||||
Sbjct: 882 gtgccttatcctcgtatccatttcatgctttcgtcctatgcgccggttatctctgctgct 941
Query: 838 aaggcttaccatgagcagctttcggtggcggaaatcaccaacagtgcatttgagccatca 897
||||| ||||||||||||||||||||| | || |||||||| | |||||||| ||
Sbjct: 942 aaggcctaccatgagcagctttcggtgcctgagatcaccaatgcggtgtttgagccttcc 1001
Query: 898 tccatgatggccaagtgtgaccctcgccacggaaagtacatggcgtgttgtctgatgtac 957
||||||||| |||||||| ||| | || || ||||||||||| || ||| ||||||||
Sbjct: 1002 agcatgatggcgaagtgtgatcctaggcatgggaagtacatggcttgctgtttgatgtac 1061
Query: 958 cgtggtgatgttgtgcccaaagatgtgaatgctgctgttggctccatcaaaaccaagaga 1017
| || |||||||| || || ||||| ||||||||||||| | |||||||||| |||||
Sbjct: 1062 aggggagatgttgttccgaaggatgtcaatgctgctgttgccaccatcaaaactaagagg 1121
Query: 1018 accattcagtttgtagattggtgccctactggtttcaaatgcggtatcaactatcagcca 1077
|| |||||||||| ||||||||||| |||||||||||||| ||||||||||| |||||
Sbjct: 1122 actgttcagtttgttgattggtgcccaactggtttcaaatgtggtatcaactaccagcct 1181
Query: 1078 cccactgttgttccgggtggtgaccttgcaaaggtgcagagggcagtttgcatgatttca 1137
|| | ||||| || |||||||||||||| ||||||||| |||| |||||||||||
Sbjct: 1182 ccttcagttgtacctggtggtgaccttgctaaggtgcagcgggctgtttgcatgatcagt 1241
Query: 1138 aactccaccagtgttgccgaggtgttcagtcgtattgatgtaaagtttgatctcatgtat 1197
||| ||| ||||| ||||||||| ||| ||||| ||||||||||||||||||
Sbjct: 1242 aacaacactgcagttgctgaggtgttctctcgcattgaccacaagtttgatctcatgtat 1301
Query: 1198 tccaagcgtgcctttgtccactggtacgtgggtgagggtatggaagaaggtgaattttct 1257
||||| | ||||||||||||||||| || |||||||||||||||||||| || || ||
Sbjct: 1302 gccaagagggcctttgtccactggtatgttggtgagggtatggaagaaggggagttctca 1361
Query: 1258 gaagctcgtgaagatcttgctgctcttgaaaaggattatgaagaagtgggtgctgag 1314
||||||||||||||||||||||||||||| || |||||||| ||||| |||||||||
Sbjct: 1362 gaagctcgtgaagatcttgctgctcttgagaaagattatgaggaagttggtgctgag 1418
Score = 54.0 bits (27), Expect = 2e-06
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 20 ttcacattggtcaggccggtattcaagtcggaaatgcctgttgggagctctactgtcttg 79
||||||||||||| ||||| || |||||||| || |||| |||||||| |||||||| |
Sbjct: 121 ttcacattggtcaagccgggatccaagtcggtaactcctgctgggagctttactgtctcg 180
Query: 80 agcatgg 86
| |||||
Sbjct: 181 aacatgg 187
>gnl|LJGI|TC72482 UniRef100_A9PL18 Cluster: Alpha-tubulin; n=2; Gossypium
hirsutum|Rep: Alpha-tubulin - Gossypium hirsutum (Upland
cotton) (Gossypium mexicanum), partial (27%)
Length = 490
Score = 210 bits (106), Expect = 2e-53
Identities = 289/350 (82%)
Strand = Plus / Plus
Query: 1 atgagggagtgcatctcagttcacattggtcaggccggtattcaagtcggaaatgcctgt 60
|||||||||||||| ||| | |||||||||||||||||||| || ||||||||||||||
Sbjct: 131 atgagggagtgcatttcaatccacattggtcaggccggtatccaggtcggaaatgcctgc 190
Query: 61 tgggagctctactgtcttgagcatggaatcgggcctgatggccaaatgccaagtgacaag 120
||||| |||||||| || || || || || |||||||||||| ||||| |||||||||
Sbjct: 191 tgggaactctactgcctcgaacacggcattcagcctgatggccagatgccgagtgacaag 250
Query: 121 actgtaggcggtggtgatgatgcattcaacactttcttcagcgagactggtgctggaaag 180
|| || ||||| || || || || |||||||| ||||||||||| || || || ||||||
Sbjct: 251 accgtcggcggaggagacgacgccttcaacaccttcttcagcgaaaccggcgccggaaag 310
Query: 181 catgtccctcgtgctgtctttgtggatcttgagcccaccgtgattgatgaggtgaggact 240
|| || || || || ||||| |||||||| ||||| ||||| || || |||||||| ||
Sbjct: 311 cacgttccacgcgccgtcttcgtggatctggagccaaccgtcatcgacgaggtgagaacc 370
Query: 241 ggaacttaccgccagctcttccacccggagcagctgatcagtgggaaagaagatgctgcc 300
|| | |||||||| ||||||||||| ||||| || ||||| || || || || || |||
Sbjct: 371 ggcgcctaccgccaactcttccaccctgagcaactcatcagcggcaaggaggacgccgcc 430
Query: 301 aacaactttgcccgtggtcattataccattgggaaagagatcgttgatct 350
|||||||| ||||||||||| || || || || |||||||||||||||||
Sbjct: 431 aacaacttcgcccgtggtcactacactatcggtaaagagatcgttgatct 480
>gnl|LJGI|AV771708 similar to UniRef100_A9PL19 Cluster: Alpha-tubulin; n=2; Gossypium
hirsutum|Rep: Alpha-tubulin - Gossypium hirsutum (Upland
cotton) (Gossypium mexicanum), partial (9%)
Length = 261
Score = 188 bits (95), Expect = 6e-47
Identities = 119/127 (93%)
Strand = Plus / Minus
Query: 1227 gggtgagggtatggaagaaggtgaattttctgaagctcgtgaagatcttgctgctcttga 1286
||||||||||||||||||||||||||||| || ||||||||||||| |||||||| |||
Sbjct: 261 gggtgagggtatggaagaaggtgaattttttggagctcgtgaagattttgctgcttttgc 202
Query: 1287 aaaggattatgaagaagtgggtgctgagtccggtgagggtggggatgacgatattgagga 1346
|||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 aaaggaataggaagaagtgggtgctgagtccggtgagggtggggatggcgatattgagga 142
Query: 1347 ctactag 1353
|||||||
Sbjct: 141 ctactag 135
>gnl|LJGI|TC81473 homologue to UniRef100_Q5G277 Cluster: Alpha-tubulin; n=2;
Ceratopteris richardii|Rep: Alpha-tubulin - Ceratopteris
richardii (Triangle waterfern), partial (27%)
Length = 494
Score = 131 bits (66), Expect = 1e-29
Identities = 117/134 (87%)
Strand = Plus / Plus
Query: 1180 aagtttgatctcatgtattccaagcgtgcctttgtccactggtacgtgggtgagggtatg 1239
||||| ||||||||||| || ||||| || |||||||||||||| |||||||| || |||
Sbjct: 57 aagttcgatctcatgtactctaagcgggcatttgtccactggtatgtgggtgaaggaatg 116
Query: 1240 gaagaaggtgaattttctgaagctcgtgaagatcttgctgctcttgaaaaggattatgaa 1299
|||||||||||||| || ||||| || || ||||| |||||||| |||||||||||||||
Sbjct: 117 gaagaaggtgaattctcagaagcccgggaggatctcgctgctctcgaaaaggattatgaa 176
Query: 1300 gaagtgggtgctga 1313
||||| || |||||
Sbjct: 177 gaagttggagctga 190
>gnl|LJGI|TC79990 homologue to UniRef100_A8DS92 Cluster: Alpha-tubulin 6; n=1;
Populus tremuloides|Rep: Alpha-tubulin 6 - Populus
tremuloides (Quaking aspen), partial (44%)
Length = 743
Score = 61.9 bits (31), Expect = 1e-08
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 385 tgcactggtctgcaagggttcttggtcttcaatgctgttggtggaggaactggttctgg 443
||||||||| ||||||| |||||||| ||||||||||| ||||| || || ||||||||
Sbjct: 529 tgcactggtttgcaaggattcttggttttcaatgctgtcggtggtggtaccggttctgg 587
>gnl|LJGI|BW614646 homologue to UniRef100_Q2TFP2 Cluster: Tubulin A; n=1; Glycine
max|Rep: Tubulin A - Glycine max (Soybean), partial
(28%)
Length = 540
Score = 54.0 bits (27), Expect = 2e-06
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 20 ttcacattggtcaggccggtattcaagtcggaaatgcctgttgggagctctactgtcttg 79
||||||||||||| ||||| || |||||||| || |||| |||||||| |||||||| |
Sbjct: 180 ttcacattggtcaagccgggatccaagtcggtaactcctgctgggagctttactgtctcg 239
Query: 80 agcatgg 86
| |||||
Sbjct: 240 aacatgg 246
>gnl|LJGI|TC77833 homologue to UniRef100_Q2TFP2 Cluster: Tubulin A; n=1; Glycine
max|Rep: Tubulin A - Glycine max (Soybean), partial
(24%)
Length = 603
Score = 54.0 bits (27), Expect = 2e-06
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 20 ttcacattggtcaggccggtattcaagtcggaaatgcctgttgggagctctactgtcttg 79
||||||||||||| ||||| || |||||||| || |||| |||||||| |||||||| |
Sbjct: 231 ttcacattggtcaagccgggatccaagtcggtaactcctgctgggagctttactgtctcg 290
Query: 80 agcatgg 86
| |||||
Sbjct: 291 aacatgg 297
>gnl|LJGI|TC72252 homologue to UniRef100_Q2TFP2 Cluster: Tubulin A; n=1; Glycine
max|Rep: Tubulin A - Glycine max (Soybean), partial
(36%)
Length = 643
Score = 54.0 bits (27), Expect = 2e-06
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 20 ttcacattggtcaggccggtattcaagtcggaaatgcctgttgggagctctactgtcttg 79
||||||||||||| ||||| || |||||||| || |||| |||||||| |||||||| |
Sbjct: 172 ttcacattggtcaagccgggatccaagtcggtaactcctgctgggagctttactgtctcg 231
Query: 80 agcatgg 86
| |||||
Sbjct: 232 aacatgg 238