Miyakogusa Predicted Gene

Lj5g3v2063100.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v2063100.1 Non Chatacterized Hit- tr|K4BCY7|K4BCY7_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,45,6e-18,seg,NULL; coiled-coil,NULL,CUFF.57009.1
         (1705 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS323833 similar to UniRef100_A7QH25 Cluster: Chromosom...   133   4e-30
gnl|LJGI|TC70143                                                       66   8e-10

>gnl|LJGI|FS323833 similar to UniRef100_A7QH25 Cluster: Chromosome chr3 scaffold_95,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr3 scaffold_95, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (14%)
          Length = 724

 Score =  133 bits (67), Expect = 4e-30
 Identities = 118/135 (87%)
 Strand = Plus / Plus

                                                                       
Query: 21  taggaaccctaggtccaaaggcatcaaggtaaaacatattctgcaaattgttctgttgct 80
           ||||||||  |||||||||||||||||||| || ||| ||||||| ||| ||||||||||
Sbjct: 152 taggaaccaaaggtccaaaggcatcaaggtcaagcatgttctgcagattattctgttgct 211

                                                                       
Query: 81  tggtatttgcttctggttgatctatcaggttaagcacaatcgtggtaggaaaaaggaatt 140
           |||| |||||||||||||||||||||||||||||| |  || || || ||| ||||||||
Sbjct: 212 tggtgtttgcttctggttgatctatcaggttaagcgctctcatgataagaagaaggaatt 271

                          
Query: 141 tgatgagaatgatgc 155
           |||| ||| ||||||
Sbjct: 272 tgatcagactgatgc 286


>gnl|LJGI|TC70143 
          Length = 689

 Score = 65.9 bits (33), Expect = 8e-10
 Identities = 54/61 (88%)
 Strand = Plus / Plus

                                                                        
Query: 1627 gaggttcgaactgatctcgatacattgccagatattagaaatgaaggatataatggtgat 1686
            ||||| ||||||||||  ||||  ||||||||||||||||||| |||| |||||||||||
Sbjct: 437  gaggtccgaactgatcctgataggttgccagatattagaaatgtaggagataatggtgat 496

             
Query: 1687 g 1687
            |
Sbjct: 497  g 497