Miyakogusa Predicted Gene
- Lj5g3v2060990.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2060990.1 CUFF.56614.1
(966 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66442 weakly similar to UniRef100_Q5Q0E2 Cluster: Cys... 74 2e-12
gnl|LJGI|TC62844 weakly similar to UniRef100_A7QKK5 Cluster: Chr... 74 2e-12
gnl|LJGI|TC64514 weakly similar to UniRef100_Q03345-2 Cluster: I... 62 7e-09
gnl|LJGI|TC79811 similar to UniRef100_A7QKK5 Cluster: Chromosome... 54 2e-06
>gnl|LJGI|TC66442 weakly similar to UniRef100_Q5Q0E2 Cluster: Cysteine-rich repeat
secretory protein 9 precursor; n=1; Arabidopsis
thaliana|Rep: Cysteine-rich repeat secretory protein 9
precursor - Arabidopsis thaliana (Mouse-ear cress),
partial (18%)
Length = 831
Score = 73.8 bits (37), Expect = 2e-12
Identities = 73/85 (85%)
Strand = Plus / Plus
Query: 327 ctcagagtgttcgttgtccaaacaggctgtgtcctggtacgacgagtgcatggtgcggta 386
|||||||||||| ||||||||| | |||||| ||||| |||||||| ||||| || ||
Sbjct: 508 ctcagagtgttccttgtccaaagaagctgtgatttggtatgacgagtgtatggttcgcta 567
Query: 387 ctccaaccgctccttcttctccacc 411
|||||| ||||| ||||||||||||
Sbjct: 568 ctccaatcgctctttcttctccacc 592
>gnl|LJGI|TC62844 weakly similar to UniRef100_A7QKK5 Cluster: Chromosome chr2
scaffold_113, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr2 scaffold_113, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (16%)
Length = 731
Score = 73.8 bits (37), Expect = 2e-12
Identities = 97/117 (82%)
Strand = Plus / Plus
Query: 361 tggtacgacgagtgcatggtgcggtactccaaccgctccttcttctccaccgcagacacc 420
|||||||||||||||| || || |||||||||||||||||||||||||| | || |||
Sbjct: 406 tggtacgacgagtgcactgttcgctactccaaccgctccttcttctccacggtcgatacc 465
Query: 421 aggcccgatgctttcctcttcaacaccgccaacgtctcgaaccaggaaagcttcatg 477
|| ||| | |||| |||||||||||||| |||| |||||||||| |||||||
Sbjct: 466 agaccccgccttggcctcctcaacaccgccaacatctccaaccaggaaaccttcatg 522
>gnl|LJGI|TC64514 weakly similar to UniRef100_Q03345-2 Cluster: Isoform B of Q03345 ;
n=1; Caenorhabditis elegans|Rep: Isoform B of Q03345 -
Caenorhabditis elegans, partial (5%)
Length = 788
Score = 61.9 bits (31), Expect = 7e-09
Identities = 94/115 (81%)
Strand = Plus / Minus
Query: 102 ctcaaccaacaaaacaaccaccaacagcaccttccaatcaaacctcaggaccctcttctc 161
|||||||||||||||||| ||||||| | | || |||| ||| |||| | |||||||||
Sbjct: 708 ctcaaccaacaaaacaacaaccaacaacccatttcaattgaacatcagaatcctcttctc 649
Query: 162 ctccctatcttccaacgccaccgccaacaatgatttccacaacagcacagtcacc 216
||| |||| |||||||||| | ||| || | ||||| |||||||||||||||
Sbjct: 648 ttccttatcgtccaacgccagcaccactaacaacttccataacagcacagtcacc 594
>gnl|LJGI|TC79811 similar to UniRef100_A7QKK5 Cluster: Chromosome chr2 scaffold_113,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_113, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 486
Score = 54.0 bits (27), Expect = 2e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 360 ctggtacgacgagtgcatggtgcggtactccaacc 394
||||||||||||||||||||| || ||||||||||
Sbjct: 379 ctggtacgacgagtgcatggttcgctactccaacc 413