Miyakogusa Predicted Gene
- Lj5g3v2060970.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2060970.1 tr|Q9XED4|Q9XED4_PHAVU Receptor-like protein
kinase homolog RK20-1 OS=Phaseolus vulgaris PE=2
SV=1,45.45,4e-19,Stress-antifung,Gnk2-homologous domain; seg,NULL;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; G,CUFF.56621.1
(632 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC64644 weakly similar to UniRef100_A7QKK6 Cluster: Chr... 1088 0.0
gnl|LJGI|TC79811 similar to UniRef100_A7QKK5 Cluster: Chromosome... 70 2e-11
>gnl|LJGI|TC64644 weakly similar to UniRef100_A7QKK6 Cluster: Chromosome chr2
scaffold_113, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr2 scaffold_113, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (17%)
Length = 717
Score = 1088 bits (549), Expect = 0.0
Identities = 549/549 (100%)
Strand = Plus / Plus
Query: 1 atgatccccaagtttcaaaacaacctattacttttccttcttcttagcagcacccttttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 atgatccccaagtttcaaaacaacctattacttttccttcttcttagcagcacccttttg 217
Query: 61 ttcactgtctcagcatctatcttcaacaacgtaagctgcacaagcaacaaaacattcact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 ttcactgtctcagcatctatcttcaacaacgtaagctgcacaagcaacaaaacattcact 277
Query: 121 caaaacagcaccttccacttcaacctcaacacccttctctcttccctctcctccaacgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 caaaacagcaccttccacttcaacctcaacacccttctctcttccctctcctccaacgcc 337
Query: 181 accggcgatgtcaggttcttcaacaccaccgccggcaaagccaccgacgccgtccacggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 accggcgatgtcaggttcttcaacaccaccgccggcaaagccaccgacgccgtccacggc 397
Query: 241 ctcttcatgtgcagaggagatgtcccctacgcgctctgcagagagtgcgtgggattcgca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 ctcttcatgtgcagaggagatgtcccctacgcgctctgcagagagtgcgtgggattcgca 457
Query: 301 acgcaaaccatagcctcatcttgcacctctgcaagagaggctgtgatctggtacaacgag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 acgcaaaccatagcctcatcttgcacctctgcaagagaggctgtgatctggtacaacgag 517
Query: 361 tgcttgctacgttactctgaccggttcatcttctccagaatggaaaccatgcccaggtac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 tgcttgctacgttactctgaccggttcatcttctccagaatggaaaccatgcccaggtac 577
Query: 421 cagatcaagatcccaatgggggatcctgtagttttgcacactcgcagattctacaccgca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 cagatcaagatcccaatgggggatcctgtagttttgcacactcgcagattctacaccgca 637
Query: 481 ttgggatccattttgaatgctctgccgaaacaagcagctctggctcttgctgctaagtcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 ttgggatccattttgaatgctctgccgaaacaagcagctctggctcttgctgctaagtcc 697
Query: 541 aacagatac 549
|||||||||
Sbjct: 698 aacagatac 706
>gnl|LJGI|TC79811 similar to UniRef100_A7QKK5 Cluster: Chromosome chr2 scaffold_113,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_113, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 486
Score = 69.9 bits (35), Expect = 2e-11
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 123 aaacagcaccttccacttcaacctcaacacccttctctcttccctctcctccaacgccac 182
||||||||||||||| |||||||||| ||| |||||||||||||| |||||||||||
Sbjct: 151 aaacagcaccttccaaaccaacctcaacctcctcctctcttccctctcttccaacgccac 210
Query: 183 cgg 185
|||
Sbjct: 211 cgg 213