Miyakogusa Predicted Gene
- Lj5g3v2058550.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2058550.1 Non Chatacterized Hit- tr|I1NGB6|I1NGB6_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,83.75,0,SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT
REGULATOR OF CHROMATIN SUBFAMILY-RELATED,NULL; HEL,CUFF.56581.1
(3240 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68024 similar to UniRef100_A7NWI8 Cluster: Chromosome... 850 0.0
gnl|LJGI|TC74419 595 e-169
gnl|LJGI|TC76370 similar to UniRef100_A7NWI8 Cluster: Chromosome... 307 2e-82
>gnl|LJGI|TC68024 similar to UniRef100_A7NWI8 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (35%)
Length = 1459
Score = 850 bits (429), Expect = 0.0
Identities = 930/1097 (84%), Gaps = 20/1097 (1%)
Strand = Plus / Plus
Query: 289 cagcttcaagaattgccttcaagcaggggagatgacctgcagtcgaagtgcctgcttgaa 348
|||||||||||||||||||| | |||||||||| |||| ||| | | |||||||||||
Sbjct: 356 cagcttcaagaattgccttccaccaggggagataacctacagacaacttgcctgcttgag 415
Query: 349 tattatggactaaagctagcagagttgcagtcaaaggttcgatctgatgtgagtgctgaa 408
| |||||| |||||||| |||||||||||| |||||||| |||| || || |||||
Sbjct: 416 ttttatggtctaaagctggcagagttgcagaggaaggttcggactgacgtcagctctgaa 475
Query: 409 aactggctaaatgttaaatgtgcatatcctgacaggcaattgtttgactggggcatgatg 468
||||||| ||| | ||||| | ||| |||| ||||||| ||| ||||||||||||
Sbjct: 476 tactggctccgcgttcagtgtgcgtgtcccgacaaacaattgtatgattggggcatgatg 535
Query: 469 agattgcgccgtccactgtatggtgttggagatccatttgccatggatgctgatgatca- 527
| |||||||| |||| |||||||||||||||||| || ||||||||||||||||||||
Sbjct: 536 cggttgcgccgcccaccgtatggtgttggagatccgttggccatggatgctgatgatcaa 595
Query: 528 gttaaaaaagaaacgggatgttgagagactgtcaagattagaagaggtggagaaaaacca 587
| ||| ||||||||||||| ||||||||| ||||||| ||||||| | || || ||
Sbjct: 596 gataaggaagaaacgggatgctgagagactatcaagataagaagagcagacaaagaatca 655
Query: 588 tatagaaactagaaaaaggaaattttttgcagaagtacttgatactgtccgtgatttcca 647
||||| || |||||||| | ||| | |||||| || | || ||||||| || |||||
Sbjct: 656 catagagaccagaaaaagaagattgtaagcagaaatattgaatgctgtccgcgagttcca 715
Query: 648 attacaaattcaagcttctttgaagcggagaaaacagaggaatgatggcatccaggcatg 707
||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||
Sbjct: 716 gttacaaattcaagcttcttggaagcggagaaaacagaggaatgacggtgtccaggcatg 775
Query: 708 gcatggaaggcaaagacaacgagcaacccgagcagagaaattgagattccaagccttgaa 767
||||||||||||||||||||| |||||||| || |||||||||||||||||||| || ||
Sbjct: 776 gcatggaaggcaaagacaacgtgcaacccgggctgagaaattgagattccaagctttaaa 835
Query: 768 gtctgacgatcaagaagcttacatgagaatggtgaaagagagtaagaatgaaagattaac 827
||| || ||||| |||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 836 gtccgatgatcaggaagcttacatgagaatggtgaaagagagtaagaatgagagattgac 895
Query: 828 tacgcttcttgaagaaacaaataaactacttgtaaatttaggagcagctgttcaacgtca 887
| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct: 896 tttacttcttgaagaaacaaataaactgcttgtaaattagggagcagctgttcaacgtca 955
Query: 888 aaaggacaacaaacatttagatggtattgaacccttggaagagtccgaagctgatttgcc 947
|| |||| |||| | | ||||||||||||||||||||||| | ||||||||||| ||
Sbjct: 956 aagggactccaaaaaatctgatggtattgaacccttggaagatttagaagctgatttacc 1015
Query: 948 tgagtcagatgc-ttcaaagaatggggtttctaaggaatcacctctagatgaaga----- 1001
||||||||||| || ||||||| ||||| || ||||| ||||||||
Sbjct: 1016 ggagtcagatgccttgaaagaat---------aaggactcgcctcttgatgaagatgtgg 1066
Query: 1002 ----gatagattccgatcataatggtgattctagagatttacttgaaggtcagcggcaat 1057
|||||| || ||| |||||||||| |||| |||||||||||||||||||||||||
Sbjct: 1067 attagatagactctgatgataatggtgacactagtgatttacttgaaggtcagcggcaat 1126
Query: 1058 acaattctgccatacactcgattcaggaaaaaatcactgagcaaccgtctatacttcaag 1117
||||||||||||||||||| ||||| ||||| | |||||||| || || || |||||||
Sbjct: 1127 acaattctgccatacactcaattcaagaaaaggtaactgagcagccatccatccttcaag 1186
Query: 1118 gtggggaattaagacaataccagatagaggggctccaatggatgatttctttgtttaata 1177
|||| ||||||||| ||||||||||| |||||||| |||||| |||||||||||||||
Sbjct: 1187 gtggagaattaagatcttaccagatagaagggctccagtggatgctttctttgtttaata 1246
Query: 1178 acaacttaaatggaattttggctgatgaaatgggacttgggaagacaatacaaacaattt 1237
||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1247 acaacttgaatggaattttggctgatgaaatgggacttgggaagacaatacaaaccattt 1306
Query: 1238 cgcttatagcacatcttctggaatacaagggtgtaactggtccacacttgattgttgctc 1297
|| | |||||||||||| |||||||||||||||| ||||| || |||||||| || ||||
Sbjct: 1307 cgttgatagcacatcttatggaatacaagggtgtgactggacctcacttgatagtggctc 1366
Query: 1298 caaaggctgttctgccaaattggatgagtgaattctcaacatgggttcctagcattacta 1357
||||||||||||||||||||||||||| |||||||||||| |||| ||| ||||| | |
Sbjct: 1367 caaaggctgttctgccaaattggatgaatgaattctcaacctgggctccaagcatcaaaa 1426
Query: 1358 ctgttctttacgatgga 1374
|| ||||||| ||||||
Sbjct: 1427 ctattctttatgatgga 1443
>gnl|LJGI|TC74419
Length = 477
Score = 595 bits (300), Expect = e-169
Identities = 306/308 (99%)
Strand = Plus / Plus
Query: 2933 gcattgcacaagccagtgataatgcggtggcggaagaaagtttactatatagagctgaaa 2992
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcattgcacaagccagtgataatgcggtggcggaagaaagtttactatatagagctgaaa 60
Query: 2993 gtgcttccatggcaagcgaaagaacaagtgaagaagatagtttccatgtgacccctgcct 3052
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtgcttccatggccagcgaaagaacaagtgaagaagatagtttccatgtgacccctgcct 120
Query: 3053 caaagagattcaagcctgaaggaacaaatttccagagacatgcgtacgaggatgtcagag 3112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caaagagattcaagcctgaaggaacaaatttccagagacatgcgtacgaggatgtcagag 180
Query: 3113 gaagtggtttaaaccagcatctgttatcctggaatactcacaggaagaagagatcaaact 3172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaagtggtttaaaccagcatctgttatcctggaatactcacaggaagaagagatcaaact 240
Query: 3173 ttcctgggccgggttcatcatccgattctagagggcaaagttcaaacggaaaagcaaact 3232
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 241 ttcctgggccgggttcatcatccgattctagagggcaaagttcaaacggaaaagccaact 300
Query: 3233 ggaactga 3240
||||||||
Sbjct: 301 ggaactga 308
>gnl|LJGI|TC76370 similar to UniRef100_A7NWI8 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (10%)
Length = 861
Score = 307 bits (155), Expect = 2e-82
Identities = 289/333 (86%), Gaps = 3/333 (0%)
Strand = Plus / Plus
Query: 2540 acaggagagaaatgttagaggagattatgcgtagaggttcaagggcgcttgggaatgatg 2599
|||| ||||||||||| |||| ||| |||||||||||| | || | ||||||| ||||
Sbjct: 1 acagaagagaaatgttggaggtgatcatgcgtagaggtactagctcacttgggacagatg 60
Query: 2600 tgcccagtgagagagaaattaaccggcttgctgctcgatcagatgaggaattttggctgt 2659
|||| || |||||||||||||| || ||||| || ||||| |||||||||||||||||||
Sbjct: 61 tgccaagcgagagagaaattaatcgccttgcagcccgatctgatgaggaattttggctgt 120
Query: 2660 ttgagaaaatggatgaagagagaaggcaagaggaaaattacagatctcgtctgatggaag 2719
|||||| |||||||||||||||||||| | |||| ||||||||||||||||| |||||||
Sbjct: 121 ttgagagaatggatgaagagagaaggctaaaggagaattacagatctcgtctcatggaag 180
Query: 2720 agcatgaattgccagattgggtgtattctccacttaataaggatgataaggccaaagagt 2779
|||||||| ||||||||||||| || ||| |||| ||||||||||| |||| ||||| |
Sbjct: 181 agcatgaagtgccagattgggtatactctgcactaaataaggatgagaaggtcaaagctt 240
Query: 2780 t---caacgctagtgttactggaaagcggaaaaggaaagaagtggtatatgcagacacat 2836
| | | |||||| | ||||||||||||||||||||||||||||||||| || ||||
Sbjct: 241 ttgatagtggtagtgtcagtggaaagcggaaaaggaaagaagtggtatatgctgatacat 300
Query: 2837 tgagtgatctacaatggatgaaggctgtggaga 2869
| |||||||||||||||||||||||||||||||
Sbjct: 301 taagtgatctacaatggatgaaggctgtggaga 333
Score = 65.9 bits (33), Expect = 1e-09
Identities = 168/213 (78%)
Strand = Plus / Plus
Query: 3028 gatagtttccatgtgacccctgcctcaaagagattcaagcctgaaggaacaaatttccag 3087
|||| |||| |||||||||||||||| ||||| ||||| ||||| | ||||| ||||
Sbjct: 462 gatactttcaatgtgacccctgcctctaagaggcccaagcatgaagaactaaattcccag 521
Query: 3088 agacatgcgtacgaggatgtcagaggaagtggtttaaaccagcatctgttatcctggaat 3147
| |||| ||||||| || |||| | ||||||| ||| || || |||| |||||||||
Sbjct: 522 aatcatgaaaacgaggacgtaagagtaggtggtttgaacgagaatgtgttttcctggaat 581
Query: 3148 actcacaggaagaagagatcaaactttcctgggccgggttcatcatccgattctagaggg 3207
||| | | ||||||||||||| || | | | | |||||||| ||| ||| ||| ||||
Sbjct: 582 actaaaaaaaagaagagatcaagctattttagccagggttcattatctgatactaaaggg 641
Query: 3208 caaagttcaaacggaaaagcaaactggaactga 3240
|| | |||||| |||| ||||||| ||||||||
Sbjct: 642 cagaattcaaatggaagagcaaacaggaactga 674