Miyakogusa Predicted Gene
- Lj5g3v2057410.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2057410.1 tr|B9HHH4|B9HHH4_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_719300 PE=4
SV=1,31.51,0.0000005,seg,NULL,CUFF.56567.1
(924 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65537 similar to UniRef100_A1KVJ3 Cluster: Opa1800 ou... 1481 0.0
>gnl|LJGI|TC65537 similar to UniRef100_A1KVJ3 Cluster: Opa1800 outer membrane
protein; n=1; Neisseria meningitidis FAM18|Rep: Opa1800
outer membrane protein - Neisseria meningitidis
serogroup C / serotype 2a (strain ATCC 700532 /FAM18),
partial (9%)
Length = 1030
Score = 1481 bits (747), Expect = 0.0
Identities = 761/768 (99%)
Strand = Plus / Plus
Query: 78 caacctcagaagtcagaacaggnnnnnnntggtctcccttgaacctgttcagggtaaccc 137
|||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 46 caacctcagaagtcagaacaggaaaaaaatggtctcccttgaacctgttcagggtaaccc 105
Query: 138 cagatctatagatgcaccttcaagtcctagaatttctttctcagctgagttcctagatga 197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 cagatctatagatgcaccttcaagtcctagaatttctttctcagctgagttcctagatga 165
Query: 198 tgaaaacttcatctccataagtccaaaccctgtgtatgaaagagatcatcaagaaaagga 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 tgaaaacttcatctccataagtccaaaccctgtgtatgaaagagatcatcaagaaaagga 225
Query: 258 acagaggaatccagagtttgagttcctatcaagcaaagggagcaacaacaacactgtggt 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 acagaggaatccagagtttgagttcctatcaagcaaagggagcaacaacaacactgtggt 285
Query: 318 aactgctgatgagcttttctttgaagggaagctcttaccgttctggcagatgcagcatct 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 aactgctgatgagcttttctttgaagggaagctcttaccgttctggcagatgcagcatct 345
Query: 378 agagaagcttaacaagatcagcctcaaacccaaagatgaaagggaattacaagaggaaga 437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 agagaagcttaacaagatcagcctcaaacccaaagatgaaagggaattacaagaggaaga 405
Query: 438 gggacaagtggaagtggtggtagtgagtaacagcaacaaggaagatagtagtagagtgaa 497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 gggacaagtggaagtggtggtagtgagtaacagcaacaaggaagatagtagtagagtgaa 465
Query: 498 taattggtttgtggatgatgacccatctcctagaccaccaaagtgcactgttctttggaa 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 taattggtttgtggatgatgacccatctcctagaccaccaaagtgcactgttctttggaa 525
Query: 558 agagttgttgaggttgaagaagcaacgctcatcaaccttatcaccctcttcttcttcctc 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 agagttgttgaggttgaagaagcaacgctcatcaaccttatcaccctcttcttcttcctc 585
Query: 618 ttcatcttcctcatccgcgagctcgctcggggatgttgcggccaaagaaggtaaagatgg 677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 ttcatcttcctcatccgcgagctcgctcggggatgttgcggccaaagaaggtaaagatgg 645
Query: 678 gacaaggagtaaagatcagcagcatgtgaagaggttgaagaaagggttggagaggacaag 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 gacaaggagtaaagatcagcagcatgtgaagaggttgaagaaagggttggagaggacaag 705
Query: 738 gtcagctactattagaattagaccaatgatcaatgttccaatttgcacacaggtgaagag 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 gtcagctactattagaattagaccaatgatcaatgttccaatttgcacacaggtgaagag 765
Query: 798 cagtgccttgcctcctctttttccacctaagaaagggaaattggagag 845
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 cagtgccttgcctcctctttttccacctaagaaagggaaattggagag 813