Miyakogusa Predicted Gene
- Lj5g3v2057370.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2057370.2 tr|G7ID84|G7ID84_MEDTR Annotation was added to
scaffolds in November 2011 Long chain fatty acid-CoA
,88.04,0,Acetyl-CoA synthetase-like,NULL; no description,NULL;
PUTATIVE UNCHARACTERIZED PROTEIN,NULL; FAMILY ,CUFF.56566.2
(1884 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV427444 similar to UniRef100_Q9C5U7 Cluster: Long-chai... 821 0.0
gnl|LJGI|TC80047 similar to UniRef100_A1X860 Cluster: ACS2; n=1;... 706 0.0
gnl|LJGI|TC79454 similar to UniRef100_A7P971 Cluster: Chromosome... 68 2e-10
>gnl|LJGI|AV427444 similar to UniRef100_Q9C5U7 Cluster: Long-chain acyl-CoA synthetase;
n=1; Arabidopsis thaliana|Rep: Long-chain acyl-CoA
synthetase - Arabidopsis thaliana (Mouse-ear cress),
partial (20%)
Length = 414
Score = 821 bits (414), Expect = 0.0
Identities = 414/414 (100%)
Strand = Plus / Plus
Query: 1021 cttggaggacgagttcgtcttatggtgtcaggagcctctcctctatcacctgatatcatg 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cttggaggacgagttcgtcttatggtgtcaggagcctctcctctatcacctgatatcatg 60
Query: 1081 gaatttttaaagatttgctttggtgggcgtgtgactgaaggatacggaatgactgagacc 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaatttttaaagatttgctttggtgggcgtgtgactgaaggatacggaatgactgagacc 120
Query: 1141 acttgtgttataagttgtattgatcagggtgacaaacttggtggtcatgttggctctcct 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acttgtgttataagttgtattgatcagggtgacaaacttggtggtcatgttggctctcct 180
Query: 1201 agcccagcctgtgaggtaaaacttgtggatgttccagaaatgaactatacatctgatgat 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agcccagcctgtgaggtaaaacttgtggatgttccagaaatgaactatacatctgatgat 240
Query: 1261 cagccccagccccgtggtgaaatttgtgtcaggggtcccattatttttaaaggatattac 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cagccccagccccgtggtgaaatttgtgtcaggggtcccattatttttaaaggatattac 300
Query: 1321 aaagatgaagctcagacgagagaagtcattgatgaagagggatggctgcatacaggagat 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaagatgaagctcagacgagagaagtcattgatgaagagggatggctgcatacaggagat 360
Query: 1381 attgggacatggttacctggtggtcgtctcaaaattattgataggaaaaagaat 1434
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 attgggacatggttacctggtggtcgtctcaaaattattgataggaaaaagaat 414
>gnl|LJGI|TC80047 similar to UniRef100_A1X860 Cluster: ACS2; n=1; Ricinus
communis|Rep: ACS2 - Ricinus communis (Castor bean),
partial (26%)
Length = 683
Score = 706 bits (356), Expect = 0.0
Identities = 359/360 (99%)
Strand = Plus / Plus
Query: 1 atgaacaggttccctgatcatcctgaaattggtacactgcatgaaaattttgtccgtgca 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 324 atgaacaggttccctgatcatcctgaaataggtacactgcatgaaaattttgtccgtgca 383
Query: 61 gttgacacttttcgagactacaaatatctgggaacccgtgttcgtgttgatggaacagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gttgacacttttcgagactacaaatatctgggaacccgtgttcgtgttgatggaacagtt 443
Query: 121 ggagagtacaaatggatgacatatggagaagcaggtgctgcccggtcagcaataggctct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ggagagtacaaatggatgacatatggagaagcaggtgctgcccggtcagcaataggctct 503
Query: 181 ggtttgattcattatggagtcccaaagggttccagcatagggttgtattttattaacaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ggtttgattcattatggagtcccaaagggttccagcatagggttgtattttattaacaga 563
Query: 241 cctgagtggctcattgttgatcatgcttgctgtgcgtattcatacgtatcagttccttta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cctgagtggctcattgttgatcatgcttgctgtgcgtattcatacgtatcagttccttta 623
Query: 301 tacgatactcttggtcctgatgctgtcaagtatattgctaatcatgctcttgtgcaagtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tacgatactcttggtcctgatgctgtcaagtatattgctaatcatgctcttgtgcaagtt 683
>gnl|LJGI|TC79454 similar to UniRef100_A7P971 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (61%)
Length = 1152
Score = 67.9 bits (34), Expect = 2e-10
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 1411 aaaattattgataggaaaaagaatatcttcaagttggcacaaggcgagtacattgctccg 1470
|||||||||||||||||||||||||||||||| ||| | ||||| || || ||||| |
Sbjct: 563 aaaattattgataggaaaaagaatatcttcaaattgtctcaaggggaatatgttgctgtg 622
Query: 1471 gagaagattgaaaa 1484
||||| ||||||||
Sbjct: 623 gagaatattgaaaa 636