Miyakogusa Predicted Gene

Lj5g3v2056280.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v2056280.1 tr|B9MWL4|B9MWL4_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_592674 PE=4
SV=1,39.47,2e-16,seg,NULL; coiled-coil,NULL,CUFF.56598.1
         (2496 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC82279 similar to UniRef100_A7NWK5 Cluster: Chromosome...  1011   0.0  
gnl|LJGI|TC78847 similar to UniRef100_A7PUA3 Cluster: Chromosome...   436   e-121
gnl|LJGI|BP055634                                                      58   3e-07

>gnl|LJGI|TC82279 similar to UniRef100_A7NWK5 Cluster: Chromosome chr5 scaffold_2,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr5 scaffold_2, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (10%)
          Length = 510

 Score = 1011 bits (510), Expect = 0.0
 Identities = 510/510 (100%)
 Strand = Plus / Plus

                                                                        
Query: 884  ctcctagtaatatattgcatggccctgcattcatcttccctctgaatcagcagcaagcag 943
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    ctcctagtaatatattgcatggccctgcattcatcttccctctgaatcagcagcaagcag 60

                                                                        
Query: 944  ctgctgcagcatctgttcgacctggatctatgaagtctttgccggttacaagcaatggag 1003
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   ctgctgcagcatctgttcgacctggatctatgaagtctttgccggttacaagcaatggag 120

                                                                        
Query: 1004 caccatccgttacacccaattcagccccgccaaatgctccttccggttcaggggcttcca 1063
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  caccatccgttacacccaattcagccccgccaaatgctccttccggttcaggggcttcca 180

                                                                        
Query: 1064 ccaccccagcaatgagcttcagctatccgagcatgcctggcaacgaaactcaatacttag 1123
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  ccaccccagcaatgagcttcagctatccgagcatgcctggcaacgaaactcaatacttag 240

                                                                        
Query: 1124 ccattttgcagaacaatgcttacccatttccaatacctgcacatgttggtggtccacctg 1183
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  ccattttgcagaacaatgcttacccatttccaatacctgcacatgttggtggtccacctg 300

                                                                        
Query: 1184 cataccgtggaactcatggccagcctccttttcctttcttcaatgggtctttttattcat 1243
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  cataccgtggaactcatggccagcctccttttcctttcttcaatgggtctttttattcat 360

                                                                        
Query: 1244 ctcaaatgatacatccttctcagattcagcagcagcagcatcctgctcagtcgcagcaga 1303
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361  ctcaaatgatacatccttctcagattcagcagcagcagcatcctgctcagtcgcagcaga 420

                                                                        
Query: 1304 gtcaacagggccaccagaataccagtatttctactggatcctcttcacagaaacatgcac 1363
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421  gtcaacagggccaccagaataccagtatttctactggatcctcttcacagaaacatgcac 480

                                          
Query: 1364 agaatcagcaacaaaagcctaatcatgcta 1393
            ||||||||||||||||||||||||||||||
Sbjct: 481  agaatcagcaacaaaagcctaatcatgcta 510


>gnl|LJGI|TC78847 similar to UniRef100_A7PUA3 Cluster: Chromosome chr7 scaffold_31,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr7 scaffold_31, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (3%)
          Length = 786

 Score =  436 bits (220), Expect = e-121
 Identities = 235/240 (97%)
 Strand = Plus / Plus

                                                                        
Query: 2257 cagccgcggctgctgctcgaaacaagacaccatcaacaagcaacggcaatgtctacactg 2316
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30   cagccgcggctgctgctcgaaacaagacaccatcaacaagcaacggcaatgtctacactg 89

                                                                        
Query: 2317 atactcttccttcttcatcttcaatatccaccaagtttcccaatgctgtttctgtgtttc 2376
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90   atactcttccttctacatcttcaatatccaccaagtttcccaatgctgtttctgtgtttc 149

                                                                        
Query: 2377 ctcaaagccttgtacagagcagcaacactgttgctcagtcaaaccagtggaagaactcag 2436
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150  ctcaaagccttgtacagagcagcaacactgttgctcagtcaaaccagtggaagaactcag 209

                                                                        
Query: 2437 caagggccacaaccccttctcagccactttctatggcttcaacacctccatcatcagtga 2496
            |||||||||||||| |||||||||||| ||||||||||||||| || |||||||||||||
Sbjct: 210  caagggccacaaccacttctcagccaccttctatggcttcaacgccgccatcatcagtga 269


>gnl|LJGI|BP055634 
          Length = 546

 Score = 58.0 bits (29), Expect = 3e-07
 Identities = 46/51 (90%), Gaps = 3/51 (5%)
 Strand = Plus / Plus

                                                              
Query: 412 cctcttccaatgtctgttcctcccaactggcctggtgggcttccttccatg 462
           ||||||||||||| ||||||   || |||||||||||||||||||||||||
Sbjct: 487 cctcttccaatgtttgttcc---cagctggcctggtgggcttccttccatg 534