Miyakogusa Predicted Gene
- Lj5g3v2046070.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2046070.1 Non Chatacterized Hit- tr|I1LFT6|I1LFT6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.32754
PE,64.44,0,FYVE/PHD zinc finger,Zinc finger, FYVE/PHD-type;
ZF_PHD_2,Zinc finger, PHD-finger; SUBFAMILY NOT NAM,CUFF.56546.1
(3735 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC80596 similar to UniRef100_Q4SU74 Cluster: Chromosome... 785 0.0
gnl|LJGI|TC68143 similar to UniRef100_A7NWM7 Cluster: Chromosome... 349 8e-95
gnl|LJGI|GO015751 similar to UniRef100_A7NWM7 Cluster: Chromosom... 178 2e-43
gnl|LJGI|TC65856 64 7e-09
>gnl|LJGI|TC80596 similar to UniRef100_Q4SU74 Cluster: Chromosome undetermined
SCAF13991, whole genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF13991,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer), partial (18%)
Length = 1030
Score = 785 bits (396), Expect = 0.0
Identities = 396/396 (100%)
Strand = Plus / Plus
Query: 3340 actagtcatggagtgctcaaaaagaaaaataaattagcgataacttctcctgttaatgat 3399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 actagtcatggagtgctcaaaaagaaaaataaattagcgataacttctcctgttaatgat 60
Query: 3400 aaatcgcatccttctccaaaatgtcaactcatttcaccaaatgacttttctatgactagt 3459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaatcgcatccttctccaaaatgtcaactcatttcaccaaatgacttttctatgactagt 120
Query: 3460 cttccattggatgctccagattgccatgaaattccagctttggatcctaaaactgttgct 3519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cttccattggatgctccagattgccatgaaattccagctttggatcctaaaactgttgct 180
Query: 3520 tctgaccctggtactgcaaaaaaccttgttgatactgtttctgacaggaattgccatgct 3579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tctgaccctggtactgcaaaaaaccttgttgatactgtttctgacaggaattgccatgct 240
Query: 3580 gtcactgatatgaattgtgattcaccaaagctcaacagaaatccagtgttggattctcaa 3639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtcactgatatgaattgtgattcaccaaagctcaacagaaatccagtgttggattctcaa 300
Query: 3640 gtggctaataatgattttgctttgaaagaggttgatttaagtgatgcatgtgatgaggtt 3699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtggctaataatgattttgctttgaaagaggttgatttaagtgatgcatgtgatgaggtt 360
Query: 3700 cttggagctggtccctcaatgaatttatctcaatag 3735
||||||||||||||||||||||||||||||||||||
Sbjct: 361 cttggagctggtccctcaatgaatttatctcaatag 396
>gnl|LJGI|TC68143 similar to UniRef100_A7NWM7 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (13%)
Length = 622
Score = 349 bits (176), Expect = 8e-95
Identities = 293/332 (88%)
Strand = Plus / Plus
Query: 2458 tgcaaagagctttttgagcacttgaacaagtaccttggtaccaagcacgaacttgatgca 2517
|||||||||||||||||||||||||| |||| ||||||||||||||| ||||| || |||
Sbjct: 291 tgcaaagagctttttgagcacttgaagaagttccttggtaccaagcatgaactagaagca 350
Query: 2518 ggctttacatggtctcttattcatagaacagctgatgactcaaaggcaggtaatagggga 2577
|||||| | |||||||||||||||||||| | || |||||| | | |||| || ||||
Sbjct: 351 ggcttttcctggtctcttattcatagaacggatggagactcagatgtgggtattacggga 410
Query: 2578 attacccagagggtggaatgcaactccaagctagctgttgcactgaccatgatggatgaa 2637
|| ||||| |||||||||||||| |||||||||||| |||||||||| ||||||| |||
Sbjct: 411 ataacccaaagggtggaatgcaattccaagctagctattgcactgactgtgatggacgaa 470
Query: 2638 tgctttttacctgttgttgataggaggagtgggatcaatttaatccataatgttttgtat 2697
||||||||||||||| ||||| | ||||||||||||||||||||||| || ||||| |||
Sbjct: 471 tgctttttacctgttattgatcgaaggagtgggatcaatttaatccacaacgttttatat 530
Query: 2698 aatactgggtcaaacttcagtcggctgaattatagtggcttttatactgctattttggag 2757
|||| ||| ||||||||||||||| |||||||| |||| ||||| |||||||||||||||
Sbjct: 531 aatagtggatcaaacttcagtcggttgaattatcgtggattttacactgctattttggag 590
Query: 2758 agaggggatgaaataatttctgcagcatctat 2789
| ||||||||||| |||||||||||||||||
Sbjct: 591 cgtggggatgaaatcatttctgcagcatctat 622
Score = 170 bits (86), Expect = 4e-41
Identities = 119/130 (91%)
Strand = Plus / Plus
Query: 2169 atgtggagatggaggggatttaatctgttgtgatggttgtccatcgacatttcatcagaa 2228
||||||||||||||| ||||||||||| |||||||| |||||||| |||||||||||||
Sbjct: 2 atgtggagatggaggtgatttaatctgctgtgatggctgtccatcaacatttcatcagag 61
Query: 2229 ttgcttggatatacagatgcttccccctggggaatggcattgtccaaattgcacctgtaa 2288
||| ||||||||||||||||||| || || |||||||||||||||||||| ||||||||
Sbjct: 62 ctgcctggatatacagatgcttcctccaggtgaatggcattgtccaaattgtacctgtaa 121
Query: 2289 attttgtgga 2298
||||||||||
Sbjct: 122 attttgtgga 131
>gnl|LJGI|GO015751 similar to UniRef100_A7NWM7 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (8%)
Length = 704
Score = 178 bits (90), Expect = 2e-43
Identities = 186/218 (85%)
Strand = Plus / Minus
Query: 1124 tcccagctacaaaaactaaagaaggaaaaatcaggcgcggcagcggcacagaaaagcaga 1183
||||| |||||| ||| ||||| |||||||||| ||| || || ||||| ||||| ||||
Sbjct: 313 tcccaactacaacaacaaaagacggaaaaatcaagcgtggtagtggcacggaaaaacaga 254
Query: 1184 aactgcgagaacagatacgggagatgctcctgaatgcaggttggacaatagactatcgcc 1243
||||||||||| | ||| |||||||||| ||||||||||||||||| ||||||||||| |
Sbjct: 253 aactgcgagaaaaaataagggagatgctgctgaatgcaggttggaccatagactatcgac 194
Query: 1244 cgcgaaggaatagagattatctagatgcagtttacattaatcccgtggggacagcctatt 1303
| ||||| ||||| || ||||| |||||||||||||||||| | || || |||||||
Sbjct: 193 ctcgaagaaatagggactatctggatgcagtttacattaattcatcaggtactgcctatt 134
Query: 1304 ggtccatcatcaaggcctatgaagctcttcaaaagcaa 1341
|||| ||||||||||||||||| || |||| |||||||
Sbjct: 133 ggtctatcatcaaggcctatgaggcacttctaaagcaa 96
>gnl|LJGI|TC65856
Length = 769
Score = 63.9 bits (32), Expect = 7e-09
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 3581 tcactgatatgaattgtgattcaccaaagctcaacagaaatccagtgttggattctcaag 3640
|||||| ||||||||||||||| || ||||| ||| ||||| || ||||||||||||||
Sbjct: 135 tcactggtatgaattgtgattcgtcagagctcgacataaatcgagcgttggattctcaag 194
Query: 3641 tggc 3644
||||
Sbjct: 195 tggc 198