Miyakogusa Predicted Gene

Lj5g3v2046010.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v2046010.1 Non Chatacterized Hit- tr|I1MM22|I1MM22_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,25.63,2e-18,seg,NULL;
Frigida,Frigida-like; FAMILY NOT NAMED,NULL,CUFF.56947.1
         (915 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC62634 similar to UniRef100_A7NWN2 Cluster: Chromosome...  1166   0.0  
gnl|LJGI|TC64949 similar to UniRef100_A7NWN2 Cluster: Chromosome...   682   0.0  
gnl|LJGI|BW605133 similar to UniRef100_A7NWN2 Cluster: Chromosom...   363   1e-99

>gnl|LJGI|TC62634 similar to UniRef100_A7NWN2 Cluster: Chromosome chr5 scaffold_2,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_2, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (48%)
          Length = 922

 Score = 1166 bits (588), Expect = 0.0
 Identities = 588/588 (100%)
 Strand = Plus / Plus

                                                                       
Query: 245 tcgacggcagcgtccagatcgcgcttcgcaacctcgaccaccgccgtgacgccgctctat 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tcgacggcagcgtccagatcgcgcttcgcaacctcgaccaccgccgtgacgccgctctat 394

                                                                       
Query: 305 cttccctcaccgaagactctcacgattcccctctcggcggtgaggttgataatggagatg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 cttccctcaccgaagactctcacgattcccctctcggcggtgaggttgataatggagatg 454

                                                                       
Query: 365 gactcatgctcaagctgaaatcgttctgtttgaagatggacgcgctagggttttgggggt 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 gactcatgctcaagctgaaatcgttctgtttgaagatggacgcgctagggttttgggggt 514

                                                                       
Query: 425 ttgtgattgggaagaagaaggagctggagtgtttgagagctgagatgccggcggcgctgt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 ttgtgattgggaagaagaaggagctggagtgtttgagagctgagatgccggcggcgctgt 574

                                                                       
Query: 485 cggagtgtgtggatccggcgaggtttgtgctggaggcgatgtcgaaggtttttccggtgg 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 cggagtgtgtggatccggcgaggtttgtgctggaggcgatgtcgaaggtttttccggtgg 634

                                                                       
Query: 545 acaaacgtggggagaagaagggtgggaatgatttgggttgggcttgtgtgctggttctgg 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 acaaacgtggggagaagaagggtgggaatgatttgggttgggcttgtgtgctggttctgg 694

                                                                       
Query: 605 agtcgttgattccggtgatggtggacccggttattgggaagtcgaggatgctggtgacgc 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 agtcgttgattccggtgatggtggacccggttattgggaagtcgaggatgctggtgacgc 754

                                                                       
Query: 665 cgtctgtgaaggaggaagctaaggacattgcagagacttggaagcagagcttggaagagc 724
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 cgtctgtgaaggaggaagctaaggacattgcagagacttggaagcagagcttggaagagc 814

                                                                       
Query: 725 gcggtggtattgagaatgtgaagacccctgatgttcatactttcttgcagcatcttgtta 784
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 gcggtggtattgagaatgtgaagacccctgatgttcatactttcttgcagcatcttgtta 874

                                                           
Query: 785 cctttgggattgttaaccatgatgatttgctcctgtatcgtaagcttg 832
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 cctttgggattgttaaccatgatgatttgctcctgtatcgtaagcttg 922



 Score =  363 bits (183), Expect = 1e-99
 Identities = 183/183 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcgtccacccccgatcccggcgaggtttgcgagcttactccgccgcccagcttcgac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91  atggcgtccacccccgatcccggcgaggtttgcgagcttactccgccgcccagcttcgac 150

                                                                       
Query: 61  gacttccaacgccaaacctccctcatgaccagctgcaccctcctctggaaggaactctcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 gacttccaacgccaaacctccctcatgaccagctgcaccctcctctggaaggaactctcc 210

                                                                       
Query: 121 gaccacttctcctcccttgaacaagaccttctcaacaaatctgaagctctcaagaacaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 gaccacttctcctcccttgaacaagaccttctcaacaaatctgaagctctcaagaacaag 270

              
Query: 181 att 183
           |||
Sbjct: 271 att 273


>gnl|LJGI|TC64949 similar to UniRef100_A7NWN2 Cluster: Chromosome chr5 scaffold_2,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_2, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (60%)
          Length = 1541

 Score =  682 bits (344), Expect = 0.0
 Identities = 344/344 (100%)
 Strand = Plus / Plus

                                                                       
Query: 561 gaagggtgggaatgatttgggttgggcttgtgtgctggttctggagtcgttgattccggt 620
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 gaagggtgggaatgatttgggttgggcttgtgtgctggttctggagtcgttgattccggt 242

                                                                       
Query: 621 gatggtggacccggttattgggaagtcgaggatgctggtgacgccgtctgtgaaggagga 680
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 gatggtggacccggttattgggaagtcgaggatgctggtgacgccgtctgtgaaggagga 302

                                                                       
Query: 681 agctaaggacattgcagagacttggaagcagagcttggaagagcgcggtggtattgagaa 740
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 agctaaggacattgcagagacttggaagcagagcttggaagagcgcggtggtattgagaa 362

                                                                       
Query: 741 tgtgaagacccctgatgttcatactttcttgcagcatcttgttacctttgggattgttaa 800
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tgtgaagacccctgatgttcatactttcttgcagcatcttgttacctttgggattgttaa 422

                                                                       
Query: 801 ccatgatgatttgctcctgtatcgtaagcttgttattgcctctgcttggaggaagcacat 860
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 ccatgatgatttgctcctgtatcgtaagcttgttattgcctctgcttggaggaagcacat 482

                                                       
Query: 861 gcctaagcttgccctttcccttggtcttgctaatcaaatgcctg 904
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 gcctaagcttgccctttcccttggtcttgctaatcaaatgcctg 526



 Score =  222 bits (112), Expect = 3e-57
 Identities = 112/112 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcgtccacccccgatcccggcgaggtttgcgagcttactccgccgcccagcttcgac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76  atggcgtccacccccgatcccggcgaggtttgcgagcttactccgccgcccagcttcgac 135

                                                               
Query: 61  gacttccaacgccaaacctccctcatgaccagctgcaccctcctctggaagg 112
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 gacttccaacgccaaacctccctcatgaccagctgcaccctcctctggaagg 187


>gnl|LJGI|BW605133 similar to UniRef100_A7NWN2 Cluster: Chromosome chr5 scaffold_2,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_2, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (17%)
          Length = 482

 Score =  363 bits (183), Expect = 1e-99
 Identities = 183/183 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcgtccacccccgatcccggcgaggtttgcgagcttactccgccgcccagcttcgac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 atggcgtccacccccgatcccggcgaggtttgcgagcttactccgccgcccagcttcgac 221

                                                                       
Query: 61  gacttccaacgccaaacctccctcatgaccagctgcaccctcctctggaaggaactctcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 gacttccaacgccaaacctccctcatgaccagctgcaccctcctctggaaggaactctcc 281

                                                                       
Query: 121 gaccacttctcctcccttgaacaagaccttctcaacaaatctgaagctctcaagaacaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 gaccacttctcctcccttgaacaagaccttctcaacaaatctgaagctctcaagaacaag 341

              
Query: 181 att 183
           |||
Sbjct: 342 att 344



 Score =  153 bits (77), Expect = 2e-36
 Identities = 77/77 (100%)
 Strand = Plus / Plus

                                                                       
Query: 245 tcgacggcagcgtccagatcgcgcttcgcaacctcgaccaccgccgtgacgccgctctat 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 tcgacggcagcgtccagatcgcgcttcgcaacctcgaccaccgccgtgacgccgctctat 465

                            
Query: 305 cttccctcaccgaagac 321
           |||||||||||||||||
Sbjct: 466 cttccctcaccgaagac 482