Miyakogusa Predicted Gene

Lj5g3v2045470.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v2045470.1 CUFF.56528.1
         (324 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC72716 similar to UniRef100_Q8GY55 Cluster: Protein TI...   490   e-138

>gnl|LJGI|TC72716 similar to UniRef100_Q8GY55 Cluster: Protein TIFY 4B; n=1;
           Arabidopsis thaliana|Rep: Protein TIFY 4B - Arabidopsis
           thaliana (Mouse-ear cress), partial (41%)
          Length = 1016

 Score =  490 bits (247), Expect = e-138
 Identities = 247/247 (100%)
 Strand = Plus / Plus

                                                                       
Query: 40  ttccgatccatcctcgacaaacccctcaaacacctcaccgaggatgacatttctcagctc 99
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 ttccgatccatcctcgacaaacccctcaaacacctcaccgaggatgacatttctcagctc 221

                                                                       
Query: 100 actcgcgaagactgtcgcagattcctcaaagaaaaagggatgcgcagaccttcctggaac 159
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 actcgcgaagactgtcgcagattcctcaaagaaaaagggatgcgcagaccttcctggaac 281

                                                                       
Query: 160 aaatcgcaagcgatccagcaggtcatttccctcaaagcgcttctagaacccaccgacgaa 219
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 aaatcgcaagcgatccagcaggtcatttccctcaaagcgcttctagaacccaccgacgaa 341

                                                                       
Query: 220 gattctcccgccgccgtgcaccgccactaccaccaccaccagcaacctccccatgcctcc 279
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 gattctcccgccgccgtgcaccgccactaccaccaccaccagcaacctccccatgcctcc 401

                  
Query: 280 tctcgag 286
           |||||||
Sbjct: 402 tctcgag 408