Miyakogusa Predicted Gene
- Lj5g3v2045230.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2045230.1 Non Chatacterized Hit- tr|I1LDZ0|I1LDZ0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.2479
PE=,79.35,0,Leucine-rich repeats, typical (most populate,Leucine-rich
repeat, typical subtype; Leucine-rich
repe,NODE_25258_length_3738_cov_79.670143.path2.1
(3336 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68459 similar to UniRef100_A7NWU8 Cluster: Chromosome... 1037 0.0
gnl|LJGI|AV415532 similar to UniRef100_A7NWU8 Cluster: Chromosom... 848 0.0
gnl|LJGI|AV409095 similar to UniRef100_A7NWU8 Cluster: Chromosom... 803 0.0
gnl|LJGI|TC69782 similar to UniRef100_A7NWU8 Cluster: Chromosome... 682 0.0
gnl|LJGI|DC593082 similar to UniRef100_Q5V2I8 Cluster: Formate d... 381 e-104
>gnl|LJGI|TC68459 similar to UniRef100_A7NWU8 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 666
Score = 1037 bits (523), Expect = 0.0
Identities = 523/523 (100%)
Strand = Plus / Plus
Query: 1 atgcaaattctttactccgatgaagcgcccaccgccggaggcgactttcccgaaaatccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 atgcaaattctttactccgatgaagcgcccaccgccggaggcgactttcccgaaaatccc 203
Query: 61 gaagacaacaagaagaactcgacctccggcgattcttcagactccggaatcgatgaaccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaagacaacaagaagaactcgacctccggcgattcttcagactccggaatcgatgaaccc 263
Query: 121 gtttccctcgatgtatcagggaggagcttggagtttccggtgccggagaatgccaaagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gtttccctcgatgtatcagggaggagcttggagtttccggtgccggagaatgccaaagaa 323
Query: 181 gactccgtcgagagcctgtacatgtacaggaacgtttacagcttgattcccaagtccgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gactccgtcgagagcctgtacatgtacaggaacgtttacagcttgattcccaagtccgtc 383
Query: 241 ggcgctcttgtgcgtttgagaacgctgaaattcttcgggaacgagattaacttgttcgcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ggcgctcttgtgcgtttgagaacgctgaaattcttcgggaacgagattaacttgttcgcg 443
Query: 301 ccggagtttgggaacatgacggcgctggagcggttgcagatgaagatttcttcacctggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ccggagtttgggaacatgacggcgctggagcggttgcagatgaagatttcttcacctggg 503
Query: 361 attggtgggttgcccttgcataagctcaagggtttgaaggagcttgagctttctaaaggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 attggtgggttgcccttgcataagctcaagggtttgaaggagcttgagctttctaaaggg 563
Query: 421 cctccaagaccttcagcttttcctattttgactgagattgctgctctcaaatgcttgacc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cctccaagaccttcagcttttcctattttgactgagattgctgctctcaaatgcttgacc 623
Query: 481 aagctttccatttgtcacttctccataagataccttcctccgg 523
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aagctttccatttgtcacttctccataagataccttcctccgg 666
>gnl|LJGI|AV415532 similar to UniRef100_A7NWU8 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (12%)
Length = 428
Score = 848 bits (428), Expect = 0.0
Identities = 428/428 (100%)
Strand = Plus / Plus
Query: 2395 tttggatcagttgaggcggcagcaaaggtgcgtactttggaagtgcaggagagttcagca 2454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttggatcagttgaggcggcagcaaaggtgcgtactttggaagtgcaggagagttcagca 60
Query: 2455 gagaaggttaaaaaatttgaatataattgtttgggagaaattagaattcttgattcttta 2514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gagaaggttaaaaaatttgaatataattgtttgggagaaattagaattcttgattcttta 120
Query: 2515 aaacacccctgcatagtggagatgtatggacaccaaataacatgcaaatggactatccca 2574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaacacccctgcatagtggagatgtatggacaccaaataacatgcaaatggactatccca 180
Query: 2575 gcggatggcaatcctgaacatcgtgtattgagatctgcaatttttatggagtatgtggaa 2634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcggatggcaatcctgaacatcgtgtattgagatctgcaatttttatggagtatgtggaa 240
Query: 2635 gcaggctccttaaaaaactatctggagaagctggcaaaagctggtgaaaagcatgttccc 2694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcaggctccttaaaaaactatctggagaagctggcaaaagctggtgaaaagcatgttccc 300
Query: 2695 gtggagttggctttatatattgccaaagatgtctcatgtgctttgtcggagctgcactcg 2754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtggagttggctttatatattgccaaagatgtctcatgtgctttgtcggagctgcactcg 360
Query: 2755 aagcacataattcatcgcgacataaaaagtgaaaacattctgtttgatattgataggaag 2814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aagcacataattcatcgcgacataaaaagtgaaaacattctgtttgatattgataggaag 420
Query: 2815 agagatga 2822
||||||||
Sbjct: 421 agagatga 428
>gnl|LJGI|AV409095 similar to UniRef100_A7NWU8 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 414
Score = 803 bits (405), Expect = 0.0
Identities = 414/416 (99%), Gaps = 2/416 (0%)
Strand = Plus / Plus
Query: 504 cataagataccttcctccggaaattggttgcttaaagagtctggagtatcttgatctttc 563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cataagataccttcctccggaaattggttgcttaaagagtctggagtatcttgatctttc 60
Query: 564 attcaataaaatcaagacattgcccacagagattacttatttgattggcttaatatccat 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attcaataaaatcaagacattgcccacagagattacttatttgattggcttaatatccat 120
Query: 624 gaaagttgcaaacaataagttggtggagctaccatcagctatgacctctctgtcaaggtt 683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaaagttgcaaacaataagttggtggagctaccatcagctatgacctctctgtcaaggtt 180
Query: 684 ggagtgtttggacctgtcaaataatagattgacttcactaggatcccttgaactcgcgtc 743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggagtgtttggacctgtcaaataatagattgacttcactaggatcccttgaactcgcgtc 240
Query: 744 aatgcacaggcttcagaacttaaatcttcagtacaacaagctgcccagcatttttcacat 803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aatgcacaggcttcagaacttaaatcttcagtacaacaagctgcccagcatttttcacat 300
Query: 804 tccttcatggatatgctgtaatatggaaggaaatgacagaggtagatgcaaagatgattg 863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tccttcatggatatgctgtaatatggaaggaaatgacagaggtagatgcaaagatgattg 360
Query: 864 tagcagttgttctgttgaaatggatgtctatgaaagcgaagtactggaaaataaag 919
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tagcagttgt--tgttgaaatggatgtctatgaaagcgaagtactggaaaataaag 414
>gnl|LJGI|TC69782 similar to UniRef100_A7NWU8 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (4%)
Length = 615
Score = 682 bits (344), Expect = 0.0
Identities = 344/344 (100%)
Strand = Plus / Plus
Query: 2993 atggattgaaagttgatatttggtcatttggatgtttacttctggagatgctgaccctgc 3052
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atggattgaaagttgatatttggtcatttggatgtttacttctggagatgctgaccctgc 60
Query: 3053 aaattccatattatggagtacatgattcactcatgcatgatagtttgcagatgggtaagc 3112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaattccatattatggagtacatgattcactcatgcatgatagtttgcagatgggtaagc 120
Query: 3113 gaccacaattaactgatgagctggaggctttgagttcaatgaatgaacccacaatgattc 3172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaccacaattaactgatgagctggaggctttgagttcaatgaatgaacccacaatgattc 180
Query: 3173 aatctggtgaagagctggaaaaatcagaagttgagattgacacgttgaagttccttgttg 3232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aatctggtgaagagctggaaaaatcagaagttgagattgacacgttgaagttccttgttg 240
Query: 3233 atttgtttcatagttgtatgaaagaaaacccaaatgagcgacctacagctgaagaaatcc 3292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atttgtttcatagttgtatgaaagaaaacccaaatgagcgacctacagctgaagaaatcc 300
Query: 3293 atgaaatgctggttggacacactagctgccttgggaagatttag 3336
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atgaaatgctggttggacacactagctgccttgggaagatttag 344
>gnl|LJGI|DC593082 similar to UniRef100_Q5V2I8 Cluster: Formate dehydrogenase alpha
subunit; n=1; Haloarcula marismortui|Rep: Formate,
partial (1%)
Length = 327
Score = 381 bits (192), Expect = e-104
Identities = 240/256 (93%)
Strand = Plus / Plus
Query: 1 atgcaaattctttactccgatgaagcgcccaccgccggaggcgactttcccgaaaatccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 atgcaaattctttactccgatgaagcgcccaccgccggaggcgactttcccgaaaatccc 125
Query: 61 gaagacaacaagaagaactcgacctccggcgattcttcagactccggaatcgatgaaccc 120
|| |||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||
Sbjct: 126 aaacacaacaagaagaactccacctccggcgattcttcatactccggaatccatgaaccc 185
Query: 121 gtttccctcgatgtatcagggaggagcttggagtttccggtgccggagaatgccaaagaa 180
|||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 186 gtttccctcgatgtatcacggaagagcttggagtttccggagccggagaatgccaaagaa 245
Query: 181 gactccgtcgagagcctgtacatgtacaggaacgtttacagcttgattcccaagtccgtc 240
||||||| | |||||||||||||||||| ||||||| |||||||||| |||| ||||||
Sbjct: 246 gactccggctagagcctgtacatgtacaagaacgttgacagcttgatgcccagatccgtc 305
Query: 241 ggcgctcttgtgcgtt 256
|||||||||||||||
Sbjct: 306 cgcgctcttgtgcgtt 321