Miyakogusa Predicted Gene

Lj5g3v2028380.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v2028380.1 Non Chatacterized Hit- tr|F6H6C7|F6H6C7_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,41.35,1e-16,C2H2 and C2HC zinc fingers,NULL; seg,NULL; zinc
finger,Zinc finger, C2H2-like; ZINC_FINGER_C2H2_1,Zi,CUFF.56428.1
         (495 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC63039 weakly similar to UniRef100_A7PTH8 Cluster: Chr...   611   e-174

>gnl|LJGI|TC63039 weakly similar to UniRef100_A7PTH8 Cluster: Chromosome chr8
           scaffold_29, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr8 scaffold_29, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (46%)
          Length = 860

 Score =  611 bits (308), Expect = e-174
 Identities = 448/495 (90%), Gaps = 6/495 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaaacatttcactaatgcccagtgtcttagaaaccatgtgaagtcctgccatcaatat 60
           ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| 
Sbjct: 85  atgaaacatttcactaatgcccagtgtcttagagaccatgttaagtcctgccatcaatac 144

                                                                       
Query: 61  gtgacttgtgacacttgtgggagtaagcaacttaagaagaatattaagaggcacctccgc 120
           ||||||||||||| |||||||| ||||||||| ||||||||| | |||||||||||||| 
Sbjct: 145 gtgacttgtgacatttgtgggactaagcaactgaagaagaatttgaagaggcacctccgt 204

                                                                       
Query: 121 gcacatgaagcaggcagttcatcagaggtgtttcgatgtgaatttcagggttgtgactgc 180
           ||||||||||| ||||||||||||||| |||||| |||||||| | ||||||||||||| 
Sbjct: 205 gcacatgaagccggcagttcatcagagttgtttcaatgtgaatatgagggttgtgactgt 264

                                                                       
Query: 181 acattctcatcaaaacctaatcttcgcacgcatgagaaggctgtgcaccttaaagaaaaa 240
           ||||||||||||||||||||||||| |||||||||||||||||||||| | |||||||||
Sbjct: 265 acattctcatcaaaacctaatcttcacacgcatgagaaggctgtgcacttcaaagaaaaa 324

                                                                       
Query: 241 ccatttgtgtgtgggtttcctgattgtggcatgagatttgcttacaaacacgtgagagat 300
           || | |||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 325 ccttatgtgtgtgggtttcctgattgtggcatgagatttgcatacaaacatgtgagagat 384

                                                                       
Query: 301 aatcatgaacaaactggcaaacatgtttttacccttggggattttgaagaagctgaccga 360
           || ||||||||||||| |||||||||||||||||||||||||||||||||||||||   |
Sbjct: 385 aaccatgaacaaactgccaaacatgtttttacccttggggattttgaagaagctgatgaa 444

                                                                       
Query: 361 caattcaggtcagggtccagcgccaggggagggagaaagagagtatgtcctacagttgaa 420
           |||||||      |||| ||  |||| |||||||||||||||||||| ||||| ||||||
Sbjct: 445 caattca------ggtctaggcccagaggagggagaaagagagtatgccctactgttgaa 498

                                                                       
Query: 421 atgttagtcaggaagcgagttaccccacatagtcaattagaaaaatggttacatatgcag 480
           |||||| | |||||| ||||||||||||  ||||||||||| |  |||||||||||||||
Sbjct: 499 atgttaattaggaagagagttaccccaccaagtcaattagagagctggttacatatgcag 558

                          
Query: 481 gatagtgaataagat 495
           |||||||||||||||
Sbjct: 559 gatagtgaataagat 573