Miyakogusa Predicted Gene
- Lj5g3v2028360.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2028360.1 Non Chatacterized Hit- tr|F6HP70|F6HP70_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,84.44,2e-17,Nucleotidylyl transferase,NULL; ValRS/IleRS/LeuRS
editing domain,Valyl/Leucyl/Isoleucyl-tRNA synthet,CUFF.56460.1
(1650 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63779 similar to UniRef100_P93736 Cluster: Valyl-tRNA... 922 0.0
gnl|LJGI|AV778016 similar to UniRef100_P93736 Cluster: Valyl-tRN... 722 0.0
gnl|LJGI|FS341978 weakly similar to UniRef100_A8JBY2 Cluster: Fl... 339 3e-92
gnl|LJGI|DC593444 similar to UniRef100_O28332 Cluster: Uncharact... 96 8e-19
>gnl|LJGI|TC63779 similar to UniRef100_P93736 Cluster: Valyl-tRNA synthetase; n=2;
Arabidopsis thaliana|Rep: Valyl-tRNA synthetase -
Arabidopsis thaliana (Mouse-ear cress), partial (14%)
Length = 691
Score = 922 bits (465), Expect = 0.0
Identities = 479/486 (98%)
Strand = Plus / Plus
Query: 115 tttcttcaaaagcaagctcagcaacaagtgcaacagccatccaatgcttctaaaaagagt 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 tttcttcaaaagcaagctcagcaacaagtgcaacagccatccaatgcttctaaaaagagt 265
Query: 175 gaaaagaaaactgtgaagcgtggtggcgcacaggatgagaatcctgaagattacgttgat 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gaaaagaaaactgtgaagcgtggtggcgcacaggatgagaatcctgaagattacgttgat 325
Query: 235 cctgagactccagtgggtgataagaagcgtatgtctcagcaactggcgaaacagtatagc 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 cctgagactccagtgggtgataagaagcgtatgtctcagcaactggcgaaacagtatagc 385
Query: 295 ccagctgcagtggagaaatcgtggtacgagtggtgggagaaatcaaannnnnnngtggca 354
||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 386 ccagctgcagtggagaaatcgtggtacgagtggtgggagaaatcaaatttttttgtggca 445
Query: 355 gatgctaacagctccaaaccaccttttgttattgttttgcctccaccgaatgtgactggt 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 gatgctaacagctccaaaccaccttttgttattgttttgcctccaccgaatgtgactggt 505
Query: 415 gctctccatataggtcatgccctaacagctgcaatagaggacatgatgattcggtggcga 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 gctctccatataggtcatgccctaacagctgcaatagaggacatgatgattcggtggcga 565
Query: 475 agaatgtctggatacaatgctttgtgggtgcctggtatggatcatgctgggattgccaca 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 agaatgtctggatacaatgctttgtgggtgcctggtatggatcatgctgggattgccaca 625
Query: 535 caggtggttgtggagaaaaagataatgcgtgaaagaaaattaaccagacatgatctgggc 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 caggtggttgtggagaaaaagataatgcgtgaaagaaaattaaccagacatgatctgggc 685
Query: 595 cgtgag 600
||||||
Sbjct: 686 cgtgag 691
Score = 95.6 bits (48), Expect = 8e-19
Identities = 48/48 (100%)
Strand = Plus / Plus
Query: 1 atggagtcatcctctgacaacaagaaagagcaagtgccacccgcaatt 48
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 atggagtcatcctctgacaacaagaaagagcaagtgccacccgcaatt 139
>gnl|LJGI|AV778016 similar to UniRef100_P93736 Cluster: Valyl-tRNA synthetase; n=2;
Arabidopsis thaliana|Rep: Valyl-tRNA synthetase -
Arabidopsis thaliana (Mouse-ear cress), partial (17%)
Length = 557
Score = 722 bits (364), Expect = 0.0
Identities = 364/364 (100%)
Strand = Plus / Minus
Query: 1287 agtaaaagaagccttagaaaagaaggggctttatagaggttctgaaaacaatgagatgcg 1346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 agtaaaagaagccttagaaaagaaggggctttatagaggttctgaaaacaatgagatgcg 498
Query: 1347 cctcggtgtctgttcaagaagcaatgatgttattgagcccatgataaagccacagtggta 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 cctcggtgtctgttcaagaagcaatgatgttattgagcccatgataaagccacagtggta 438
Query: 1407 tgtcaattgcaatgatatggctaaacaagctcttcatgctgccgtggatgaagaaaataa 1466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tgtcaattgcaatgatatggctaaacaagctcttcatgctgccgtggatgaagaaaataa 378
Query: 1467 aaagctagagattattccaaaacaatatttagctgattggaagagatggctagaaaatat 1526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 aaagctagagattattccaaaacaatatttagctgattggaagagatggctagaaaatat 318
Query: 1527 acgtgattggtgcatttcacgtcagctatggtggggtcaccaaatacctgcatggtatgt 1586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 acgtgattggtgcatttcacgtcagctatggtggggtcaccaaatacctgcatggtatgt 258
Query: 1587 gactttagaggatgacatactgcaagaatttggcgcttacaatgatcattgggtagtggc 1646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 gactttagaggatgacatactgcaagaatttggcgcttacaatgatcattgggtagtggc 198
Query: 1647 aaga 1650
||||
Sbjct: 197 aaga 194
>gnl|LJGI|FS341978 weakly similar to UniRef100_A8JBY2 Cluster: Flagellar associated
protein; n=1; Chlamydomonas reinhardtii|Rep: Flagellar
associated protein - Chlamydomonas reinhardtii, partial
(5%)
Length = 462
Score = 339 bits (171), Expect = 3e-92
Identities = 174/175 (99%)
Strand = Plus / Plus
Query: 115 tttcttcaaaagcaagctcagcaacaagtgcaacagccatccaatgcttctaaaaagagt 174
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 tttcttctaaagcaagctcagcaacaagtgcaacagccatccaatgcttctaaaaagagt 347
Query: 175 gaaaagaaaactgtgaagcgtggtggcgcacaggatgagaatcctgaagattacgttgat 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 gaaaagaaaactgtgaagcgtggtggcgcacaggatgagaatcctgaagattacgttgat 407
Query: 235 cctgagactccagtgggtgataagaagcgtatgtctcagcaactggcgaaacagt 289
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 cctgagactccagtgggtgataagaagcgtatgtctcagcaactggcgaaacagt 462
Score = 95.6 bits (48), Expect = 8e-19
Identities = 48/48 (100%)
Strand = Plus / Plus
Query: 1 atggagtcatcctctgacaacaagaaagagcaagtgccacccgcaatt 48
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 atggagtcatcctctgacaacaagaaagagcaagtgccacccgcaatt 221
>gnl|LJGI|DC593444 similar to UniRef100_O28332 Cluster: Uncharacterized protein
AF_1947 precursor; n=1; Archaeoglobus fulgidus|Rep:
Uncharacterized protein AF_1947 precursor -
Archaeoglobus fulgidus, partial (8%)
Length = 463
Score = 95.6 bits (48), Expect = 8e-19
Identities = 48/48 (100%)
Strand = Plus / Plus
Query: 1 atggagtcatcctctgacaacaagaaagagcaagtgccacccgcaatt 48
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 atggagtcatcctctgacaacaagaaagagcaagtgccacccgcaatt 461