Miyakogusa Predicted Gene
- Lj5g3v2027210.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2027210.1 Non Chatacterized Hit- tr|I1MQ14|I1MQ14_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
GN=G,79.23,0,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; coiled-coil,NULL; LIM_bind,NULL,CUFF.56764.1
(2604 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BW626060 homologue to UniRef100_A7QVK1 Cluster: Chromos... 926 0.0
gnl|LJGI|TC70098 weakly similar to UniRef100_Q6H974 Cluster: SEU... 856 0.0
gnl|LJGI|TC75146 similar to UniRef100_A7QVK1 Cluster: Chromosome... 468 e-131
gnl|LJGI|AV406571 similar to UniRef100_Q6H974 Cluster: SEU1 prot... 305 7e-82
gnl|LJGI|TC71879 similar to UniRef100_A7QVK1 Cluster: Chromosome... 252 1e-65
gnl|LJGI|BP085380 220 3e-56
gnl|LJGI|TC74521 similar to UniRef100_A7QVK1 Cluster: Chromosome... 84 5e-15
>gnl|LJGI|BW626060 homologue to UniRef100_A7QVK1 Cluster: Chromosome chr16 scaffold_189,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_189, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 487
Score = 926 bits (467), Expect = 0.0
Identities = 473/475 (99%)
Strand = Plus / Plus
Query: 1126 ggttctaaatctggaaagggatttgaggcaacttctgaagttctccctagacttaatgaa 1185
|||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 13 ggttctaaatctggaaagggatttgaggcaccttttgaagttctccctagacttaatgaa 72
Query: 1186 atcaaatttggaagtggtgtgatcgatgaacttctgtttttggacttgccgcgtgaatat 1245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 atcaaatttggaagtggtgtgatcgatgaacttctgtttttggacttgccgcgtgaatat 132
Query: 1246 agatttccttctggtgtgttaatgttagaatatgccaaagcagttcaagagagtgtgtac 1305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 agatttccttctggtgtgttaatgttagaatatgccaaagcagttcaagagagtgtgtac 192
Query: 1306 gagcagcttcgtgttgttcgtgagggtcaactccgtatcatattcacgcaagatctgaag 1365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 gagcagcttcgtgttgttcgtgagggtcaactccgtatcatattcacgcaagatctgaag 252
Query: 1366 atattatcgtgggagttttgtgcaaggcgccatgaagaactccttcctcgaaggttggtt 1425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 atattatcgtgggagttttgtgcaaggcgccatgaagaactccttcctcgaaggttggtt 312
Query: 1426 gcaccgcaggtaaaccagttggttcaagtagcacaaaaatgccaaagtacaattgctgag 1485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gcaccgcaggtaaaccagttggttcaagtagcacaaaaatgccaaagtacaattgctgag 372
Query: 1486 agtggatctgatgggatttctcagcaggatttgcaaacaaacagcaatatggtattgact 1545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 agtggatctgatgggatttctcagcaggatttgcaaacaaacagcaatatggtattgact 432
Query: 1546 gctgggcgtcatcttgcgaagagtttggagttgcagtcactaaatgacttaggtt 1600
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gctgggcgtcatcttgcgaagagtttggagttgcagtcactaaatgacttaggtt 487
>gnl|LJGI|TC70098 weakly similar to UniRef100_Q6H974 Cluster: SEU1 protein; n=1;
Antirrhinum majus|Rep: SEU1 protein - Antirrhinum majus
(Garden snapdragon), partial (7%)
Length = 748
Score = 856 bits (432), Expect = 0.0
Identities = 444/448 (99%)
Strand = Plus / Plus
Query: 2157 acaacgctctctaagtgcaaatagcatactacagcaaggtcattcacagggctctcaggc 2216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acaacgctctctaagtgcaaatagcatactacagcaaggtcattcacagggctctcaggc 60
Query: 2217 aaaccaggctctgcaacagcagatgattcaacaactgctgcaggagatgtctcatagcaa 2276
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
Sbjct: 61 aaaccaggctctgcaacagcaaatgattcaacaactgctgcaggagatgtctcatagcca 120
Query: 2277 tggagggatgcaacctcagtcccttggtggatccaatggaaatggtaacatggcaaagaa 2336
|||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 121 tggagggatgcaacctcagtcccttggtggatcccatggaaatggtaacatggccaagaa 180
Query: 2337 tggtggggtgggctttggtggccagactctacgcgtagctggagatacttctaatgtttc 2396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tggtggggtgggctttggtggccagactctacgcgtagctggagatacttctaatgtttc 240
Query: 2397 tggaagtaatggacctgtacctagccggagcaacagcttcaaagccgcttcgaacagtga 2456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tggaagtaatggacctgtacctagccggagcaacagcttcaaagccgcttcgaacagtga 300
Query: 2457 ttcttctgcagctggtggcaacaatggatttaaccagagaacatctgacatgccacaaaa 2516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttcttctgcagctggtggcaacaatggatttaaccagagaacatctgacatgccacaaaa 360
Query: 2517 tctccatttgccagaagatgtggatattggcaatgatttcatggatagtagttttttcaa 2576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tctccatttgccagaagatgtggatattggcaatgatttcatggatagtagttttttcaa 420
Query: 2577 cagtgatctagatgataacatgggctat 2604
||||||||||||||||||||||||||||
Sbjct: 421 cagtgatctagatgataacatgggctat 448
>gnl|LJGI|TC75146 similar to UniRef100_A7QVK1 Cluster: Chromosome chr16 scaffold_189,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_189, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 593
Score = 468 bits (236), Expect = e-131
Identities = 241/243 (99%)
Strand = Plus / Plus
Query: 1 atgacatcttctcgggtggctggaggattaacacactcatcatcaagttctggcatattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 atgacatcttctcgggtggctggaggattaacacactcatcatcaagttctggcatattc 410
Query: 61 tttcagggagatgggcagtcacagaatgcagttaactctcacttgagctcatcttatggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 tttcagggagatgggcagtcacagaatgcagttaactctcacttgagctcatcttatggt 470
Query: 121 aactcatctaactcgattcctggaactgggcgttcaaatctgggtctggtctctggggat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 aactcatctaactcgattcctggaactgggcgttcaaatctgggtctggtctctggggat 530
Query: 181 atgagtaatgctgttttaaacagtgtgacaaactcagcaccaagtgttggagccagttct 240
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 531 atgagtaatgctgttttaaacagtgtgacaaactcagcacncagtgttggagccagttct 590
Query: 241 cta 243
|||
Sbjct: 591 cta 593
>gnl|LJGI|AV406571 similar to UniRef100_Q6H974 Cluster: SEU1 protein; n=1; Antirrhinum
majus|Rep: SEU1 protein - Antirrhinum majus (Garden
snapdragon), partial (7%)
Length = 178
Score = 305 bits (154), Expect = 7e-82
Identities = 172/178 (96%)
Strand = Plus / Plus
Query: 893 caaagcgcccatatgacagtggtgtttgtgcccgtcgactgatgcaatacctttatcatc 952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caaagcgcccatatgacagtggtgtttgtgcccgtcgactgatgcaatacctttatcatc 60
Query: 953 aaagacaacgaccaagtgataatagtatagcctattggagaaaatttgtggctgaatatt 1012
||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 61 aaagacaacgaccaagtgataatagtatagcctatgggagaagatttgtggctgaatatt 120
Query: 1013 actcacctcgtgcaaagaaacggtggtgcttgtcattatatgataatgttggtcatca 1070
||||||||||||| |||||||||||||| || |||||||||||||||||||||||||
Sbjct: 121 actcacctcgtgcgaagaaacggtggtgggtggcattatatgataatgttggtcatca 178
>gnl|LJGI|TC71879 similar to UniRef100_A7QVK1 Cluster: Chromosome chr16 scaffold_189,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_189, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 693
Score = 252 bits (127), Expect = 1e-65
Identities = 266/311 (85%), Gaps = 1/311 (0%)
Strand = Plus / Plus
Query: 8 cttctcgggtggctggaggattaacacactcatcatcaagttctggcatattctttcagg 67
|||||||||||||||| || ||||| || ||||| ||||| ||||| || |||||||| |
Sbjct: 334 cttctcgggtggctggggggttaacccaatcatcgtcaagatctggaattttctttcaag 393
Query: 68 gagatgggcagtcacagaatgcagttaactctcacttgagctcatcttatggtaactcat 127
|||| |||||||||||||||| ||||||||||||||| ||||| ||| || ||||||||
Sbjct: 394 gagacgggcagtcacagaatgtagttaactctcacttaagctcgccttttgttaactcat 453
Query: 128 ctaactcgattcctggaactgggcgttcaaatctgggtctggtctctggggatatgagta 187
||||| ||||||||| ||||||||| || ||||||||||| ||| ||||||||| ||
Sbjct: 454 ctaacatagttcctggaaatgggcgttcgaacctgggtctggtttctagggatatgaata 513
Query: 188 atgctgttttaaacagtgtgacaaactcagcaccaagtgttggagccagttctctagtta 247
|||| ||||| ||||||||| ||||||| ||||||||||||||||||| |||| | || |
Sbjct: 514 atgcagttttgaacagtgtggcaaactcggcaccaagtgttggagccaattctatggtca 573
Query: 248 cagatgccaattctgcactttctggggggcccaatttgcagagaagtgcaagctttaaca 307
|||||| ||||| ||||| ||| || ||||| | ||||||||||||||||||||||||
Sbjct: 574 cagatggaaattccgcactctct-ggtggccccacatgcagagaagtgcaagctttaaca 632
Query: 308 ctgagtcatac 318
| || ||||||
Sbjct: 633 cagactcatac 643
>gnl|LJGI|BP085380
Length = 453
Score = 220 bits (111), Expect = 3e-56
Identities = 253/280 (90%), Gaps = 18/280 (6%)
Strand = Plus / Minus
Query: 2332 aagaatggtggggtgggctttggtggccagactctacgcgtagctggagatacttctaat 2391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 aagaatggtggggtgggctttggtggccagactctacgcgtagctggagatacttctaat 392
Query: 2392 gtttctggaagtaatggacctgtacctag-ccggag-caacagcttcaaagccgct-tcg 2448
||||||||||||||||||||||||||||| |||||| || ||||||| |||||||| |||
Sbjct: 391 gtttctggaagtaatggacctgtacctagnccggagccaccagcttccaagccgctgtcg 332
Query: 2449 aa-cagtgattcttctg-cagctggtgg-caacaatggatttaacca-gagaacatctg- 2503
|| |||||||||||||| |||||||||| | || |||||||||||| |||||| ||||
Sbjct: 331 aaccagtgattcttctgccagctggtggcccaccatggatttaaccncgagaacctctgc 272
Query: 2504 acatg-ccacaaaatct-ccatttg-ccagaaga-tgtggatatt--ggcaatgatttca 2557
||||| || |||||||| ||||||| |||||||| |||||||||| | |||||||||||
Sbjct: 271 acatgcccccaaaatctcccatttgcccagaagagtgtggatattgcgccaatgatttca 212
Query: 2558 tgga-tag-tagtttttt--caacagtgatctagatgata 2593
|||| ||| ||||||||| || |||||||||||||||||
Sbjct: 211 tggattagttagttttttcacaccagtgatctagatgata 172
>gnl|LJGI|TC74521 similar to UniRef100_A7QVK1 Cluster: Chromosome chr16 scaffold_189,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_189, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 1086
Score = 83.8 bits (42), Expect = 5e-15
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 2431 agcttcaaagccgcttcgaacagtgattcttctgcagctggtggcaacaatggatttaac 2490
||||||||||| ||||| | ||||||||||| ||| ||||| ||||||||||| || |||
Sbjct: 650 agcttcaaagcagcttcaagcagtgattcttatgccgctggaggcaacaatgggttcaac 709
Query: 2491 cagagaacatctga 2504
||||||||||||||
Sbjct: 710 cagagaacatctga 723
Score = 63.9 bits (32), Expect = 5e-09
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 1766 tggaacaactagccaatgttcaaggtctgcctactgatcgaaatacactgaataag 1821
||||||||||||| || |||||||||||||| |||||||| || ||||| ||||||
Sbjct: 21 tggaacaactagcaaacgttcaaggtctgccaactgatcgtaacacacttaataag 76
Score = 58.0 bits (29), Expect = 3e-07
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 1927 aactaccagaatattctcatgaggcaaaactcgatgaattcaaactctggttcgcttcag 1986
|||||||||||| | | |||||||||||||||||||| |||| | |||| || ||||||
Sbjct: 182 aactaccagaatcatataatgaggcaaaactcgatgaactcaagccctggctcacttcag 241
Query: 1987 cgagaagga 1995
| |||||||
Sbjct: 242 caagaagga 250