Miyakogusa Predicted Gene
- Lj5g3v2027100.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2027100.1 Non Chatacterized Hit- tr|I1NGR1|I1NGR1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.37556
PE,82.48,0,SUBFAMILY NOT NAMED,NULL; RHOMBOID-RELATED,Peptidase S54,
rhomboid; no description,NULL; Rhomboid-li,CUFF.56423.1
(1014 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62934 similar to UniRef100_A7QVI2 Cluster: Chromosome... 1848 0.0
gnl|LJGI|TC59912 similar to UniRef100_A7QVI2 Cluster: Chromosome... 484 e-136
gnl|LJGI|BP055034 similar to UniRef100_A7QVI2 Cluster: Chromosom... 466 e-130
gnl|LJGI|TC79970 weakly similar to UniRef100_A7QKI0 Cluster: Chr... 76 5e-13
gnl|LJGI|TC59464 similar to UniRef100_A7NYY8 Cluster: Chromosome... 56 4e-07
>gnl|LJGI|TC62934 similar to UniRef100_A7QVI2 Cluster: Chromosome chr16 scaffold_189,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_189, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (90%)
Length = 1289
Score = 1848 bits (932), Expect = 0.0
Identities = 932/932 (100%)
Strand = Plus / Plus
Query: 83 cctactctgctcctcctgcttctgcctatgtttataatcctgaaactcattggacatcat 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 cctactctgctcctcctgcttctgcctatgtttataatcctgaaactcattggacatcat 250
Query: 143 ggcttgtgcctctgtttgtggttgctaatattgctgtttttgttgtgactatgtacatca 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 ggcttgtgcctctgtttgtggttgctaatattgctgtttttgttgtgactatgtacatca 310
Query: 203 acaattgtcacaagcacaatctcggtttccaaggtgattgtattgctggattccttggta 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 acaattgtcacaagcacaatctcggtttccaaggtgattgtattgctggattccttggta 370
Query: 263 gattctcctttcagcctctgcaggagaatccattgcttggtccttcttcctcagcattaa 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 gattctcctttcagcctctgcaggagaatccattgcttggtccttcttcctcagcattaa 430
Query: 323 ccaagatgggaggccttaagtgggataatgttgtgaaccatcatcagggatggagactcg 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 ccaagatgggaggccttaagtgggataatgttgtgaaccatcatcagggatggagactcg 490
Query: 383 tcacatgcatctggctccatgctggagtcattcatttgctagctaacatgttgagcctgg 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 tcacatgcatctggctccatgctggagtcattcatttgctagctaacatgttgagcctgg 550
Query: 443 tcttcattggcattcgccttgaacagcaatttggttttctgaggataggaatcatatacc 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 tcttcattggcattcgccttgaacagcaatttggttttctgaggataggaatcatatacc 610
Query: 503 tggtttctggatttggtgggagtgtattgtcatgtctttttcttggaaaccacatatctg 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 tggtttctggatttggtgggagtgtattgtcatgtctttttcttggaaaccacatatctg 670
Query: 563 ttggggcttctggtgctctttttggacttcttggagcaatgctcgcagaactcatcacaa 622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 ttggggcttctggtgctctttttggacttcttggagcaatgctcgcagaactcatcacaa 730
Query: 623 actggactatatattccaataaagtaatggctttgctcacccttctagttatcatcgtta 682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 actggactatatattccaataaagtaatggctttgctcacccttctagttatcatcgtta 790
Query: 683 tcaaccttgccattggcattttgccacacgtcgataattttgctcatattgggggatttc 742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 tcaaccttgccattggcattttgccacacgtcgataattttgctcatattgggggatttc 850
Query: 743 tggtgggacttctcctcggcttcattttgctgccccgtcctcagttcgggtggttagagc 802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 tggtgggacttctcctcggcttcattttgctgccccgtcctcagttcgggtggttagagc 910
Query: 803 agcggcatcttcctgctggtgttcgcctgaagtcaaaatacaaggcttaccaatatgttc 862
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 911 agcggcatcttcctgctggtgttcgcctgaagtcaaaatacaaggcttaccaatatgttc 970
Query: 863 tattgatcgcctctctaatcctcttggttgctgggctaacggttgcattggtgatgctgt 922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 971 tattgatcgcctctctaatcctcttggttgctgggctaacggttgcattggtgatgctgt 1030
Query: 923 tgaggggtgagaatgggaatgatcactgccattggtgtcgctacataacatgtgttccaa 982
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1031 tgaggggtgagaatgggaatgatcactgccattggtgtcgctacataacatgtgttccaa 1090
Query: 983 cttctaaatgggaatgcagtgacacttaaaag 1014
||||||||||||||||||||||||||||||||
Sbjct: 1091 cttctaaatgggaatgcagtgacacttaaaag 1122
Score = 65.9 bits (33), Expect = 5e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 1 atggagagaaaaagagatgttgaaagtggtgttaatggagg 41
|||||||||| |||||||||||| |||||||||||||||||
Sbjct: 109 atggagagaagaagagatgttgagagtggtgttaatggagg 149
>gnl|LJGI|TC59912 similar to UniRef100_A7QVI2 Cluster: Chromosome chr16 scaffold_189,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_189, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (91%)
Length = 1369
Score = 484 bits (244), Expect = e-136
Identities = 631/760 (83%)
Strand = Plus / Plus
Query: 253 ttccttggtagattctcctttcagcctctgcaggagaatccattgcttggtccttcttcc 312
||||| ||||||||||||||||||||||| | |||||||||| || |||| ||||||||
Sbjct: 369 ttcctgggtagattctcctttcagcctctccgggagaatccactgtttggaccttcttct 428
Query: 313 tcagcattaaccaagatgggaggccttaagtgggataatgttgtgaaccatcatcaggga 372
| | ||||| |||||||||| ||||||||||| |||||||||| | ||| ||||||
Sbjct: 429 gcgacgttaacaaagatgggagctcttaagtgggacgatgttgtgaatcgtcaccaggga 488
Query: 373 tggagactcgtcacatgcatctggctccatgctggagtcattcatttgctagctaacatg 432
|||||||| ||||||| || ||| | ||||||||| | ||||||||| ||| || |||
Sbjct: 489 tggagacttttcacatgtatttggttacatgctggaattattcatttggcagcaaatatg 548
Query: 433 ttgagcctggtcttcattggcattcgccttgaacagcaatttggttttctgaggatagga 492
||||| ||||| ||||||||||||||||||||||| |||||||| ||| |||||||||||
Sbjct: 549 ttgagtctggttttcattggcattcgccttgaacaacaatttgggtttgtgaggatagga 608
Query: 493 atcatatacctggtttctggatttggtgggagtgtattgtcatgtctttttcttggaaac 552
||||| |||||| | || ||||| ||||||||||||||||||| ||| ||| || |||||
Sbjct: 609 atcatttacctgttgtccggattcggtgggagtgtattgtcatctctatttattagaaac 668
Query: 553 cacatatctgttggggcttctggtgctctttttggacttcttggagcaatgctcgcagaa 612
|||| || ||||| |||||| ||||| | |||||||||||||||||||||||| |||||
Sbjct: 669 aacatctccgttggtgcttctagtgctttgtttggacttcttggagcaatgctctcagaa 728
Query: 613 ctcatcacaaactggactatatattccaataaagtaatggctttgctcacccttctagtt 672
|| ||||||||||||| ||| || |||||||||| | ||||||||||| || | ||
Sbjct: 729 cttatcacaaactggagtatttactccaataaagcagctgctttgctcacactagtcctt 788
Query: 673 atcatcgttatcaaccttgccattggcattttgccacacgtcgataattttgctcatatt 732
|| || | | |||| |||||||||||||| |||||||| || |||||||||||||||||
Sbjct: 789 attattgctgtcaatcttgccattggcatgttgccacatgttgataattttgctcatata 848
Query: 733 gggggatttctggtgggacttctcctcggcttcattttgctgccccgtcctcagttcggg 792
|| ||||| || | ||| |||| || || || ||||| || ||||||||||| ||||||
Sbjct: 849 ggaggattcctagcaggatttcttcttggttttattttcctaccccgtcctcaattcggg 908
Query: 793 tggttagagcagcggcatcttcctgctggtgttcgcctgaagtcaaaatacaaggcttac 852
|||| |||||||| ||||||||| |||||||||| | || ||||| ||||||||||||
Sbjct: 909 tggtcagagcagcaacatcttcctactggtgttcgtgtaaaatcaaagtacaaggcttac 968
Query: 853 caatatgttctattgatcgcctctctaatcctcttggttgctgggctaacggttgcattg 912
||||||||||||| ||| | |||| | || || | |||||| || | |||| ||
Sbjct: 969 caatatgttctatggattgtctctgctgttctattcatcgctgggttatccattgcttta 1028
Query: 913 gtgatgctgttgaggggtgagaatgggaatgatcactgccattggtgtcgctacataaca 972
||||||||||| | ||||||||||| ||||||||||||||||||||| |||| ||||
Sbjct: 1029 gtgatgctgtttcgcggtgagaatggatatgatcactgccattggtgtcactacctaacg 1088
Query: 973 tgtgttccaacttctaaatgggaatgcagtgacacttaaa 1012
||||| || |||||||||||| ||||| ||||| |||||
Sbjct: 1089 tgtgtacctacttctaaatggaaatgcgatgacagttaaa 1128
Score = 75.8 bits (38), Expect = 5e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 114 ttataatcctgaaactcattggacatcatggcttgtgcctctgtttgtgg 163
|||| |||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 230 ttatgatccagaaacccattggacatcatggcttgtgcctctgtttgtgg 279
>gnl|LJGI|BP055034 similar to UniRef100_A7QVI2 Cluster: Chromosome chr16 scaffold_189,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_189, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 515
Score = 466 bits (235), Expect = e-130
Identities = 235/235 (100%)
Strand = Plus / Plus
Query: 83 cctactctgctcctcctgcttctgcctatgtttataatcctgaaactcattggacatcat 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 cctactctgctcctcctgcttctgcctatgtttataatcctgaaactcattggacatcat 222
Query: 143 ggcttgtgcctctgtttgtggttgctaatattgctgtttttgttgtgactatgtacatca 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 ggcttgtgcctctgtttgtggttgctaatattgctgtttttgttgtgactatgtacatca 282
Query: 203 acaattgtcacaagcacaatctcggtttccaaggtgattgtattgctggattccttggta 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 acaattgtcacaagcacaatctcggtttccaaggtgattgtattgctggattccttggta 342
Query: 263 gattctcctttcagcctctgcaggagaatccattgcttggtccttcttcctcagc 317
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 gattctcctttcagcctctgcaggagaatccattgcttggtccttcttcctcagc 397
Score = 65.9 bits (33), Expect = 5e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 1 atggagagaaaaagagatgttgaaagtggtgttaatggagg 41
|||||||||| |||||||||||| |||||||||||||||||
Sbjct: 81 atggagagaagaagagatgttgagagtggtgttaatggagg 121
>gnl|LJGI|TC79970 weakly similar to UniRef100_A7QKI0 Cluster: Chromosome chr2
scaffold_112, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr2 scaffold_112, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (16%)
Length = 484
Score = 75.8 bits (38), Expect = 5e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 114 ttataatcctgaaactcattggacatcatggcttgtgcctctgtttgtgg 163
|||| |||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 313 ttatgatccagaaacccattggacatcatggcttgtgcctctgtttgtgg 362
>gnl|LJGI|TC59464 similar to UniRef100_A7NYY8 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (37%)
Length = 743
Score = 56.0 bits (28), Expect = 4e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 259 ggtagattctcctttcagcctctgcaggagaatccattgcttggtccttcttcctc 314
|||||||||||||||||||| || |||||||||| | ||||||||||||||||
Sbjct: 427 ggtagattctcctttcagcccctcaaggagaatcccctctttggtccttcttcctc 482