Miyakogusa Predicted Gene

Lj5g3v2013930.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v2013930.1 Non Chatacterized Hit- tr|K4AUE7|K4AUE7_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,40.8,4e-17,PROTEIN F12F6.8, PARTIALLY CONFIRMED BY TRANSCRIPT
EVIDENCE,NULL; F-BOX/LEUCINE RICH REPEAT PROTEIN,,CUFF.56495.1
         (502 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC74328 weakly similar to UniRef100_Q337F4 Cluster: F-b...   387   e-107

>gnl|LJGI|TC74328 weakly similar to UniRef100_Q337F4 Cluster: F-box domain containing
           protein, expressed; n=2; Oryza sativa Japonica
           Group|Rep: F-box domain containing protein, expressed -
           Oryza sativa subsp. japonica (Rice), partial (16%)
          Length = 507

 Score =  387 bits (195), Expect = e-107
 Identities = 195/195 (100%)
 Strand = Plus / Plus

                                                                       
Query: 308 aacacaaaggaatcatcagagaaattgatcagactattcgtcagaaggcttctcggttac 367
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   aacacaaaggaatcatcagagaaattgatcagactattcgtcagaaggcttctcggttac 60

                                                                       
Query: 368 gtagctttatcacatgcatggatgactcatgcgtcatgtgccagcgaacaagaactgatg 427
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gtagctttatcacatgcatggatgactcatgcgtcatgtgccagcgaacaagaactgatg 120

                                                                       
Query: 428 aagggctagttaggtggtacaagtacgaggaagggctttggaaaacagatgaggtgaggt 487
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aagggctagttaggtggtacaagtacgaggaagggctttggaaaacagatgaggtgaggt 180

                          
Query: 488 cccttgcactttgag 502
           |||||||||||||||
Sbjct: 181 cccttgcactttgag 195