Miyakogusa Predicted Gene
- Lj5g3v2013700.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2013700.3 Non Chatacterized Hit- tr|F6I7G5|F6I7G5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,51.16,0.000000000001,LRR,Leucine-rich repeat; L domain-like,NULL;
LEURICHRPT,NULL; LRR_8,NULL; no description,NULL; seg,N,CUFF.56365.3
(612 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69923 similar to UniRef100_Q1S5Q1 Cluster: Leucine-ri... 597 e-170
gnl|LJGI|FS348582 weakly similar to UniRef100_A7QZ74 Cluster: Ch... 446 e-125
gnl|LJGI|FS322006 weakly similar to UniRef100_A7P9S7 Cluster: Ch... 115 3e-25
>gnl|LJGI|TC69923 similar to UniRef100_Q1S5Q1 Cluster: Leucine-rich repeat; n=1;
Medicago truncatula|Rep: Leucine-rich repeat - Medicago
truncatula (Barrel medic), partial (6%)
Length = 572
Score = 597 bits (301), Expect = e-170
Identities = 313/317 (98%)
Strand = Plus / Plus
Query: 296 atgatgaaaacccttatctttgtggatccccactaccaaatgaatgtcctggtgatactt 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgatgaaaacccttatctttgtggatccccactaccaaatgaatgtcctggtgatactt 60
Query: 356 cgcatcaagctcctaaaagcaaaaataatgaagatgaagatgacaagaaagataaggtgg 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgcatcaagctcctaaaagcaaaaataatgaagatgaagatgacaagaaagataaggtgg 120
Query: 416 aaaaagtatggttctactttgtcatagcagttggctttgcaactggtttttggggagtta 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaaaagtatggttctactttgtcatagcagttggctttgcaactggtttttggggagtta 180
Query: 476 ttggcacattattgttcaagaagacatggaggcatgcttacttcagatgggtggaagatg 535
|||| || |||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 181 ttggaactttattgttcaagaagaaatggaggcatgcttacttcagatgggtggaagatg 240
Query: 536 tagctgacaagatttatgtggcagttgtgatcaaagttgcaaagccaatgatgagaaacc 595
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagctgataagatttatgtggcagttgtgatcaaagttgcaaagccaatgatgagaaacc 300
Query: 596 acagtcacggatgatag 612
|||||||||||||||||
Sbjct: 301 acagtcacggatgatag 317
>gnl|LJGI|FS348582 weakly similar to UniRef100_A7QZ74 Cluster: Chromosome undetermined
scaffold_265, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_265,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (12%)
Length = 429
Score = 446 bits (225), Expect = e-125
Identities = 225/225 (100%)
Strand = Plus / Minus
Query: 388 gatgaagatgacaagaaagataaggtggaaaaagtatggttctactttgtcatagcagtt 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 gatgaagatgacaagaaagataaggtggaaaaagtatggttctactttgtcatagcagtt 370
Query: 448 ggctttgcaactggtttttggggagttattggcacattattgttcaagaagacatggagg 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 ggctttgcaactggtttttggggagttattggcacattattgttcaagaagacatggagg 310
Query: 508 catgcttacttcagatgggtggaagatgtagctgacaagatttatgtggcagttgtgatc 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 catgcttacttcagatgggtggaagatgtagctgacaagatttatgtggcagttgtgatc 250
Query: 568 aaagttgcaaagccaatgatgagaaaccacagtcacggatgatag 612
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 aaagttgcaaagccaatgatgagaaaccacagtcacggatgatag 205
>gnl|LJGI|FS322006 weakly similar to UniRef100_A7P9S7 Cluster: Chromosome chr14
scaffold_9, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_9, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (8%)
Length = 715
Score = 115 bits (58), Expect = 3e-25
Identities = 58/58 (100%)
Strand = Plus / Plus
Query: 1 atggacttgtcagaaaacaatttggttggatccattcctaatggaataaccaggctca 58
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 atggacttgtcagaaaacaatttggttggatccattcctaatggaataaccaggctca 715