Miyakogusa Predicted Gene
- Lj5g3v2013650.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2013650.1 tr|B9I489|B9I489_POPTR Actin depolymerizing
factor 10 OS=Populus trichocarpa GN=ADF10 PE=4
SV=1,88.32,0,ADF_H,Actin-binding, cofilin/tropomyosin type; no
description,NULL; Actin depolymerizing proteins,NU,gene.g62712.t1.1
(414 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AU252005 similar to UniRef100_Q8H2B6 Cluster: Pollen sp... 628 e-180
gnl|LJGI|TC60283 similar to UniRef100_Q4JHK7 Cluster: Actin depo... 143 1e-33
gnl|LJGI|TC60150 similar to UniRef100_Q8H2B6 Cluster: Pollen spe... 131 4e-30
gnl|LJGI|TC60947 similar to UniRef100_Q7XSN9 Cluster: Actin-depo... 117 6e-26
gnl|LJGI|FS345159 homologue to UniRef100_Q2PK12 Cluster: Actin d... 90 1e-17
gnl|LJGI|TC58090 homologue to UniRef100_Q2PK12 Cluster: Actin de... 90 1e-17
gnl|LJGI|CB829462 homologue to UniRef100_Q2PK12 Cluster: Actin d... 72 3e-12
gnl|LJGI|TC59530 similar to UniRef100_Q2PK12 Cluster: Actin depo... 72 3e-12
gnl|LJGI|TC58418 homologue to UniRef100_Q2PK12 Cluster: Actin de... 64 7e-10
>gnl|LJGI|AU252005 similar to UniRef100_Q8H2B6 Cluster: Pollen specific
actin-depolymerizing factor 2; n=1; Nicotiana
tabacum|Rep: Pollen specific actin-depolymerizing factor
2 - Nicotiana tabacum (Common tobacco), partial (77%)
Length = 317
Score = 628 bits (317), Expect = e-180
Identities = 317/317 (100%)
Strand = Plus / Plus
Query: 6 gaacgcggcatctggaatggctgttgatgatgaatgtaaattgaagttcgtggagctaaa 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaacgcggcatctggaatggctgttgatgatgaatgtaaattgaagttcgtggagctaaa 60
Query: 66 ggcaaagaggaactaccgtttcattgtgtttaagattgagagtcaggatgtggtggtgga 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggcaaagaggaactaccgtttcattgtgtttaagattgagagtcaggatgtggtggtgga 120
Query: 126 aaaacttggaagtccagaagaaacctatgatgactttgctgcttctctgcctcctgatga 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaaacttggaagtccagaagaaacctatgatgactttgctgcttctctgcctcctgatga 180
Query: 186 gtgccgatatgctgtctttgattttgatttcaccactaatgagaactgccagaaaagcaa 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtgccgatatgctgtctttgattttgatttcaccactaatgagaactgccagaaaagcaa 240
Query: 246 gattttcttcattgcatgggctcctgatatagcaaaggtgagacacaagatggtgtatgc 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gattttcttcattgcatgggctcctgatatagcaaaggtgagacacaagatggtgtatgc 300
Query: 306 tagctctaaggacaggt 322
|||||||||||||||||
Sbjct: 301 tagctctaaggacaggt 317
>gnl|LJGI|TC60283 similar to UniRef100_Q4JHK7 Cluster: Actin depolymerizing factor;
n=1; Gossypium hirsutum|Rep: Actin depolymerizing factor
- Gossypium hirsutum (Upland cotton) (Gossypium
mexicanum), complete
Length = 837
Score = 143 bits (72), Expect = 1e-33
Identities = 177/212 (83%)
Strand = Plus / Plus
Query: 179 ctgatgagtgccgatatgctgtctttgattttgatttcaccactaatgagaactgccaga 238
|||||||||| ||||||||||| | |||||||||||| |||| | ||||| |||||||
Sbjct: 310 ctgatgagtgtcgatatgctgtttatgattttgattttgtcactgaagagaattgccaga 369
Query: 239 aaagcaagattttcttcattgcatgggctcctgatatagcaaaggtgagacacaagatgg 298
|||||| ||||||||||||||||||| | ||||||| | | ||| || |||||||
Sbjct: 370 aaagcaggattttcttcattgcatggtcccctgatacttctagggttaggagcaagatga 429
Query: 299 tgtatgctagctctaaggacaggttcaagagggaacttgatggcgttcaagttgagttgc 358
| ||||| ||||| || ||||| ||||||||||| |||||||| |||||||||||||||
Sbjct: 430 tttatgccagctccaaagacagattcaagagggagcttgatggaattcaagttgagttgc 489
Query: 359 aagcaacagatcctagcgagatgagccttgat 390
||||||| ||||||| |||||| | ||||||
Sbjct: 490 aagcaactgatcctactgagatgggtcttgat 521
>gnl|LJGI|TC60150 similar to UniRef100_Q8H2B6 Cluster: Pollen specific
actin-depolymerizing factor 2; n=1; Nicotiana
tabacum|Rep: Pollen specific actin-depolymerizing factor
2 - Nicotiana tabacum (Common tobacco), complete
Length = 854
Score = 131 bits (66), Expect = 4e-30
Identities = 171/206 (83%)
Strand = Plus / Plus
Query: 179 ctgatgagtgccgatatgctgtctttgattttgatttcaccactaatgagaactgccaga 238
|||||||||| || ||||| |||| ||||||||||||||||||| | ||||| |||||||
Sbjct: 288 ctgatgagtgtcgttatgccgtctatgattttgatttcaccactgaagagaattgccaga 347
Query: 239 aaagcaagattttcttcattgcatgggctcctgatatagcaaaggtgagacacaagatgg 298
|||||||||| ||||||||||||||| | || || || ||| |||||| |||||||
Sbjct: 348 aaagcaagatcttcttcattgcatggtcaccagacatttcaagggtgaggatgaagatgg 407
Query: 299 tgtatgctagctctaaggacaggttcaagagggaacttgatggcgttcaagttgagttgc 358
||||||| || || ||||| || |||||||||||||| || ||| ||||| | || | |
Sbjct: 408 tgtatgcaagttccaaggatagattcaagagggaactcgacggcattcaattcgaacttc 467
Query: 359 aagcaacagatcctagcgagatgagc 384
||||||| ||||| || |||||||||
Sbjct: 468 aagcaactgatccaagtgagatgagc 493
>gnl|LJGI|TC60947 similar to UniRef100_Q7XSN9 Cluster: Actin-depolymerizing factor 6;
n=1; Oryza sativa Japonica Group|Rep:
Actin-depolymerizing factor 6 - Oryza sativa subsp.
japonica (Rice), complete
Length = 877
Score = 117 bits (59), Expect = 6e-26
Identities = 167/203 (82%)
Strand = Plus / Plus
Query: 182 atgagtgccgatatgctgtctttgattttgatttcaccactaatgagaactgccagaaaa 241
||||||| || ||||| |||| |||||||||||||| || ||||||| ||||||||||
Sbjct: 272 atgagtgtcgttatgccgtctatgattttgatttcataacagatgagaattgccagaaaa 331
Query: 242 gcaagattttcttcattgcatgggctcctgatatagcaaaggtgagacacaagatggtgt 301
||||||| |||||| |||||||| | || ||||| ||| |||||| ||||||||||
Sbjct: 332 gcaagatcttcttctttgcatggtcaccagatatctcaagggtgaggatgaagatggtgt 391
Query: 302 atgctagctctaaggacaggttcaagagggaacttgatggcgttcaagttgagttgcaag 361
|||| || || |||||||| |||||||| ||| | |||||| | |||||||| ||||||
Sbjct: 392 atgcaagttccaaggacagattcaagagagaattggatggcatccaagttgaactgcaag 451
Query: 362 caacagatcctagcgagatgagc 384
|||| ||||| || || ||||||
Sbjct: 452 caactgatccaagtgaaatgagc 474
>gnl|LJGI|FS345159 homologue to UniRef100_Q2PK12 Cluster: Actin depolymerizing
factor-like protein; n=1; Arachis hypogaea|Rep: Actin
depolymerizing factor-like protein - Arachis hypogaea
(Peanut), partial (98%)
Length = 809
Score = 89.7 bits (45), Expect = 1e-17
Identities = 126/153 (82%)
Strand = Plus / Plus
Query: 238 aaaagcaagattttcttcattgcatgggctcctgatatagcaaaggtgagacacaagatg 297
||||||| |||||| |||||||||||| | ||||||| | ||| |||||| |||||||
Sbjct: 419 aaaagcaggatttttttcattgcatggtcgcctgatacatcaagggtgaggagcaagatg 478
Query: 298 gtgtatgctagctctaaggacaggttcaagagggaacttgatggcgttcaagttgagttg 357
| ||||| ||||| || ||||| ||||||||||| | ||||| ||||| ||||||||
Sbjct: 479 atttatgcaagctccaaagacagattcaagagggagttggatggaattcaaattgagttg 538
Query: 358 caagcaacagatcctagcgagatgagccttgat 390
|||||||| ||||||| |||||| | ||||||
Sbjct: 539 caagcaactgatcctactgagatgggtcttgat 571
>gnl|LJGI|TC58090 homologue to UniRef100_Q2PK12 Cluster: Actin depolymerizing
factor-like protein; n=1; Arachis hypogaea|Rep: Actin
depolymerizing factor-like protein - Arachis hypogaea
(Peanut), partial (98%)
Length = 971
Score = 89.7 bits (45), Expect = 1e-17
Identities = 126/153 (82%)
Strand = Plus / Plus
Query: 238 aaaagcaagattttcttcattgcatgggctcctgatatagcaaaggtgagacacaagatg 297
||||||| |||||| |||||||||||| | ||||||| | ||| |||||| |||||||
Sbjct: 358 aaaagcaggatttttttcattgcatggtcgcctgatacatcaagggtgaggagcaagatg 417
Query: 298 gtgtatgctagctctaaggacaggttcaagagggaacttgatggcgttcaagttgagttg 357
| ||||| ||||| || ||||| ||||||||||| | ||||| ||||| ||||||||
Sbjct: 418 atttatgcaagctccaaagacagattcaagagggagttggatggaattcaaattgagttg 477
Query: 358 caagcaacagatcctagcgagatgagccttgat 390
|||||||| ||||||| |||||| | ||||||
Sbjct: 478 caagcaactgatcctactgagatgggtcttgat 510
>gnl|LJGI|CB829462 homologue to UniRef100_Q2PK12 Cluster: Actin depolymerizing
factor-like protein; n=1; Arachis hypogaea|Rep: Actin
depolymerizing factor-like protein - Arachis hypogaea
(Peanut), partial (91%)
Length = 512
Score = 71.9 bits (36), Expect = 3e-12
Identities = 111/136 (81%)
Strand = Plus / Plus
Query: 238 aaaagcaagattttcttcattgcatgggctcctgatatagcaaaggtgagacacaagatg 297
||||||| |||||||||| |||||||| | ||||| | | ||| ||| || |||||||
Sbjct: 374 aaaagcaggattttcttcgttgcatggtcccctgacacatcaagggttcgaagcaagatg 433
Query: 298 gtgtatgctagctctaaggacaggttcaagagggaacttgatggcgttcaagttgagttg 357
| ||||||||||| || || || ||||||||||| || ||||| ||||| | ||||||
Sbjct: 434 atttatgctagctccaaagatagattcaagagggagctggatgggattcaaatagagttg 493
Query: 358 caagcaacagatccta 373
|||||||| |||||||
Sbjct: 494 caagcaactgatccta 509
>gnl|LJGI|TC59530 similar to UniRef100_Q2PK12 Cluster: Actin depolymerizing
factor-like protein; n=1; Arachis hypogaea|Rep: Actin
depolymerizing factor-like protein - Arachis hypogaea
(Peanut), complete
Length = 810
Score = 71.9 bits (36), Expect = 3e-12
Identities = 111/136 (81%)
Strand = Plus / Plus
Query: 238 aaaagcaagattttcttcattgcatgggctcctgatatagcaaaggtgagacacaagatg 297
||||||| |||||||||| |||||||| | ||||| | | ||| ||| || |||||||
Sbjct: 333 aaaagcaggattttcttcgttgcatggtcccctgacacatcaagggttcgaagcaagatg 392
Query: 298 gtgtatgctagctctaaggacaggttcaagagggaacttgatggcgttcaagttgagttg 357
| ||||||||||| || || || ||||||||||| || ||||| ||||| | ||||||
Sbjct: 393 atttatgctagctccaaagatagattcaagagggagctggatgggattcaaatagagttg 452
Query: 358 caagcaacagatccta 373
|||||||| |||||||
Sbjct: 453 caagcaactgatccta 468
>gnl|LJGI|TC58418 homologue to UniRef100_Q2PK12 Cluster: Actin depolymerizing
factor-like protein; n=1; Arachis hypogaea|Rep: Actin
depolymerizing factor-like protein - Arachis hypogaea
(Peanut), partial (98%)
Length = 804
Score = 63.9 bits (32), Expect = 7e-10
Identities = 83/100 (83%)
Strand = Plus / Plus
Query: 291 caagatggtgtatgctagctctaaggacaggttcaagagggaacttgatggcgttcaagt 350
||||||| | ||||| ||||| || ||||| ||||||||||| | ||||| ||||| |
Sbjct: 489 caagatgatttatgcaagctccaaagacagattcaagagggagttggatggaattcaaat 548
Query: 351 tgagttgcaagcaacagatcctagcgagatgagccttgat 390
||||||||||||||| ||||||| |||||| | ||||||
Sbjct: 549 tgagttgcaagcaactgatcctactgagatgggtcttgat 588