Miyakogusa Predicted Gene

Lj5g3v2013640.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v2013640.1 Non Chatacterized Hit- tr|E0CV37|E0CV37_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,42.31,0.000002,seg,NULL; Retrovirus zinc finger-like domains,Zinc
finger, CCHC-type; zinc finger,Zinc finger, CCHC-,CUFF.56370.1
         (1977 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW613623                                                     398   e-110

>gnl|LJGI|BW613623 
          Length = 448

 Score =  398 bits (201), Expect = e-110
 Identities = 207/209 (99%)
 Strand = Plus / Plus

                                                                       
Query: 147 ggggattgaatcacatgaacacgatcaggtattgctccctgaacccgtagtagtggccac 206
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 ggggattgaatcacatgaacacgatcaggtattgctccctgaacccgtagtagtggccac 299

                                                                       
Query: 207 agcaatccccataaccctagaaacccctaaggaacaaggtgcagaaccaattgaagccac 266
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 agcaatccccataaccctagaaacccctaaggaacaaggtgcagaaccaattgaagccac 359

                                                                       
Query: 267 tgtagtgcatcctgtacctgatcagagacctgcaaagacgcataggaagaagaagaaaaa 326
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tgtagtgcaccctgtacctgatcagagacctgcaaagacgcataggaagaagaagaaaaa 419

                                        
Query: 327 ggagactgtgctggaaccccaaccggaac 355
           |||||||||||| ||||||||||||||||
Sbjct: 420 ggagactgtgctcgaaccccaaccggaac 448



 Score =  214 bits (108), Expect = 2e-54
 Identities = 108/108 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggatagccatagccagagcgagttattgcactcgaagaagaggcgcagagaggaaaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94  atggatagccatagccagagcgagttattgcactcgaagaagaggcgcagagaggaaaag 153

                                                           
Query: 61  cctgaacccttgccttctccggaacaggatcaggaacagagttgcagc 108
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 cctgaacccttgccttctccggaacaggatcaggaacagagttgcagc 201