Miyakogusa Predicted Gene
- Lj5g3v2013430.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v2013430.1 Non Chatacterized Hit- tr|I0Z574|I0Z574_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,66.13,7e-18,seg,NULL,
gene.Ljchr5_pseudomol_20120830.path1.gene5529.1
(477 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS319911 similar to UniRef100_A9TSA0 Cluster: Predicted... 729 0.0
gnl|LJGI|BP065241 similar to UniRef100_A7QXF8 Cluster: Chromosom... 100 2e-20
>gnl|LJGI|FS319911 similar to UniRef100_A9TSA0 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(6%)
Length = 592
Score = 729 bits (368), Expect = 0.0
Identities = 443/474 (93%), Gaps = 4/474 (0%)
Strand = Plus / Plus
Query: 1 atgcataatcaacacacgctcttactcagattccccacattgccctctccctctgtcatc 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 99 atgcataatcaacacacgctcttactcaaattccccacattgccctctccctctgtcatc 158
Query: 61 gtccttcatctcacagaggcaaagctcagcttcaacacgagaagaatacacactgcgaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 gtccttcatctcacagaggcaaagctcagcttcaacacgagaagaatacacactgcgaga 218
Query: 121 accttcttcagaagaagcaactgggttctccccaaggcaatgtctactagctcttccttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 accttcttcagaagaagcaactgggttctccccaaggcaatgtctactagctcttccttc 278
Query: 181 agctctcgctttggtggcggcgatgatgacaccaccaccaccaccacnnnnnnnnnnnnn 240
||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 279 agctctcgctttggtggcggcgatgatgacaccac---caccaccaccaccaacaacaac 335
Query: 241 nnnnnnnnnnntaacggtgcttctttccgcaacttcaagctgaacgagtcaacattcttg 300
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 aacaacaacaataacggtgcttctttccgcaacttcaagctgaacgagtcaacattcttg 395
Query: 301 gcttcgctcatgcccaagacagagattggcgttgaccggtttctccattctcacccatac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 396 gcttcgctcatgcccaagacagagattggcgttgaccggtttctccattctcacccacac 455
Query: 361 tatgatggacgcggtgctctcatcgctatcttcgattctggtgtagacccggctgctacg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 tatgatggacgcggtgctctcatcgctatcttcgattctggtgtagacccggctgctacg 515
Query: 421 ggattacaggttacctcagatgggaagccg-aaaattcttgatattcttgattg 473
| |||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 516 gaattacaggttacctcagatgggaagccgaaaaattcttgatattcttgattg 569
>gnl|LJGI|BP065241 similar to UniRef100_A7QXF8 Cluster: Chromosome undetermined
scaffold_222, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_222,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (14%)
Length = 563
Score = 99.6 bits (50), Expect = 2e-20
Identities = 81/90 (90%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 373 ggtgctctcatcgctatcttcgattctggtgtagacccggctgctacgggattacaggtt 432
||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||
Sbjct: 17 ggtgctctcatcgctatct-cgattctggtgtagacccggctgcggatggattacagatt 75
Query: 433 acctcagatgggaagccgaaaattcttgat 462
||||| || ||||| |||||||||||||||
Sbjct: 76 acctcggacgggaaaccgaaaattcttgat 105