Miyakogusa Predicted Gene
- Lj5g3v1999250.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1999250.1 Non Chatacterized Hit- tr|G7IAL8|G7IAL8_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,75.32,0,CAD &
PB1 domains,NULL; RWP_RK,Plant regulator RWP-RK; RWP-RK,Plant
regulator RWP-RK; PB1,Phox/Bem1p,CUFF.56344.1
(2055 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP064926 similar to UniRef100_A7QU44 Cluster: Chromosom... 345 7e-94
gnl|LJGI|FS357522 similar to UniRef100_Q5NB82 Cluster: Nodule in... 168 9e-41
gnl|LJGI|BP084286 107 3e-22
gnl|LJGI|TC81686 UniRef100_Q7X9C0 Cluster: NIN-like protein 2; n... 62 1e-08
>gnl|LJGI|BP064926 similar to UniRef100_A7QU44 Cluster: Chromosome chr2 scaffold_176
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:,
partial (1%)
Length = 181
Score = 345 bits (174), Expect = 7e-94
Identities = 181/182 (99%), Gaps = 1/182 (0%)
Strand = Plus / Plus
Query: 556 cagagtcttaagattgctgctggtgttgaacttgaggatggtggttcagttgaaattatt 615
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cagagtcttaagat-gctgctggtgttgaacttgaggatggtggttcagttgaaattatt 59
Query: 616 gaagcaacaaatgaaagagttacgttgaggcttgaatctattccaattgctcaatctgtt 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 gaagcaacaaatgaaagagttacgttgaggcttgaatctattccaattgctcaatctgtt 119
Query: 676 caatcaccacctggacctggtggctcgccgaatatggtggaggaagtgccaaaggatcca 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 caatcaccacctggacctggtggctcgccgaatatggtggaggaagtgccaaaggatcca 179
Query: 736 tc 737
||
Sbjct: 180 tc 181
>gnl|LJGI|FS357522 similar to UniRef100_Q5NB82 Cluster: Nodule inception protein-like;
n=1; Oryza sativa Japonica Group|Rep: Nodule inception
protein-like - Oryza sativa subsp. japonica (Rice),
partial (8%)
Length = 393
Score = 168 bits (85), Expect = 9e-41
Identities = 172/201 (85%)
Strand = Plus / Minus
Query: 908 aacgttatttcgctgggagtcttaaagatgctgcaaagagccttggtgtttgccccacta 967
||||||||||| |||||| ||||| ||||||||||| |||||||||||||| || ||||
Sbjct: 393 aacgttatttcagtgggagccttaaggatgctgcaaaaagccttggtgtttgtcctacta 334
Query: 968 caatgaagcgcatctgtaggcagcacggtatatcccgctggccatctcggaagatcaaca 1027
||||||||||||| || |||| | || ||||| |||||||||||||| ||||| || |
Sbjct: 333 caatgaagcgcatatgcaggctaaatgggatatctcgctggccatctcgaaagataaaaa 274
Query: 1028 aggttaaccggtccttgtccaagctcaagcgtgttattgaatccgtccaaggtgctgaag 1087
||||||| | ||| | |||||||||||| ||||||| ||||| ||||| ||||||||||
Sbjct: 273 aggttaatagttccctatccaagctcaagtgtgttatggaatcagtccatggtgctgaag 214
Query: 1088 gagcattcggtttgaattctc 1108
||||||| ||| |||||||||
Sbjct: 213 gagcatttggtctgaattctc 193
>gnl|LJGI|BP084286
Length = 244
Score = 107 bits (54), Expect = 3e-22
Identities = 88/94 (93%), Gaps = 4/94 (4%)
Strand = Plus / Minus
Query: 1965 ttcgagatcatcagcaagccac-ataatca-gggttttggtgcatgatatcacttccaat 2022
|||||||||||||||| ||||| |||||| |||||||||||||||||||||||||| ||
Sbjct: 244 ttcgagatcatcagca-gccaccataatcccgggttttggtgcatgatatcacttcccat 186
Query: 2023 ctgggaagctcatgtgagagctca-ggggagtga 2055
|||||||||||||||||||||||| |||||||||
Sbjct: 185 ctgggaagctcatgtgagagctcacggggagtga 152
>gnl|LJGI|TC81686 UniRef100_Q7X9C0 Cluster: NIN-like protein 2; n=1; Lotus
japonicus|Rep: NIN-like protein 2 - Lotus japonicus,
complete
Length = 3814
Score = 61.9 bits (31), Expect = 1e-08
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 920 ctgggagtcttaaagatgctgcaaagagccttggtgtttgccc 962
|||||||||| || ||||||||||||||| |||||||||||||
Sbjct: 2188 ctgggagtctgaaggatgctgcaaagagcattggtgtttgccc 2230