Miyakogusa Predicted Gene
- Lj5g3v1988860.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1988860.1 tr|F4ZG52|F4ZG52_MEDTR MATE2 transporter
OS=Medicago truncatula GN=MATE2 PE=2 SV=1,79.44,0,MatE,Multi
antimicrobial extrusion protein; MATE EFFLUX FAMILY PROTEIN,NULL;
MULTIDRUG RESISTANCE PR,CUFF.56309.1
(1482 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS339206 weakly similar to UniRef100_A7PZN2 Cluster: Ch... 1253 0.0
gnl|LJGI|TC79646 similar to UniRef100_A7QG49 Cluster: Chromosome... 1156 0.0
gnl|LJGI|GO025491 similar to UniRef100_A7Q9Z0 Cluster: Chromosom... 54 3e-06
>gnl|LJGI|FS339206 weakly similar to UniRef100_A7PZN2 Cluster: Chromosome chr15
scaffold_40, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr15 scaffold_40, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (40%)
Length = 735
Score = 1253 bits (632), Expect = 0.0
Identities = 632/632 (100%)
Strand = Plus / Plus
Query: 1 atggacgctcccctgctccacggcgttggacaagaggcggcggcggaggagggtgactat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 atggacgctcccctgctccacggcgttggacaagaggcggcggcggaggagggtgactat 163
Query: 61 gcggcggtgaagaatttccaggacgccaggaaggttttctggactgaaagtgtcagaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 gcggcggtgaagaatttccaggacgccaggaaggttttctggactgaaagtgtcagaata 223
Query: 121 tggcgaattgcggtgcctatcattttcaacatatggtgccaatatggtgttaactccatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 tggcgaattgcggtgcctatcattttcaacatatggtgccaatatggtgttaactccatt 283
Query: 181 accagcatcttcgttggccatctcggtgaccttgaactctctgctgtttctctcattaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 accagcatcttcgttggccatctcggtgaccttgaactctctgctgtttctctcattaac 343
Query: 241 tctgtcattggtactttctcttttggcttcatgcttggcatggggagcgcaactgagact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 tctgtcattggtactttctcttttggcttcatgcttggcatggggagcgcaactgagact 403
Query: 301 ctttgcggtcaagcttttggagctgggcaggttggcatgcttggtgtttatatgcagcgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 ctttgcggtcaagcttttggagctgggcaggttggcatgcttggtgtttatatgcagcgc 463
Query: 361 tcgtgggtaatcttatttgtgactagtatttgcctcttgccaatatacatttttgctggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 tcgtgggtaatcttatttgtgactagtatttgcctcttgccaatatacatttttgctggt 523
Query: 421 ccaattttaacgcttcttggccaacagaaagacatagttgatcttgctggacatttctct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 ccaattttaacgcttcttggccaacagaaagacatagttgatcttgctggacatttctct 583
Query: 481 cttttagtaattcctcaatttctctcactttccctcaattttccaacccaaaagttcctt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 cttttagtaattcctcaatttctctcactttccctcaattttccaacccaaaagttcctt 643
Query: 541 caagctcagagtaaggtgaatgtaattgcatggattgggtttgtggctctaattgtgcat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 caagctcagagtaaggtgaatgtaattgcatggattgggtttgtggctctaattgtgcat 703
Query: 601 gttgggatgctctggctcttaatttatgtatt 632
||||||||||||||||||||||||||||||||
Sbjct: 704 gttgggatgctctggctcttaatttatgtatt 735
>gnl|LJGI|TC79646 similar to UniRef100_A7QG49 Cluster: Chromosome undetermined
scaffold_91, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_91, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(38%)
Length = 897
Score = 1156 bits (583), Expect = 0.0
Identities = 610/619 (98%)
Strand = Plus / Plus
Query: 864 taatgcagtgattgctgttgattccatctctatatgcatgaatttcaatgggtgggaaaa 923
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1 taatgcagtgattgctgttgattccatctctatatgcatgaatttcaatggatgggaaaa 60
Query: 924 catgatcttcattggagtaaatgcagctatcagtgtcagagtttccaacgaacttggact 983
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 61 catgatcttcattggagtaaatgcagctatcagtgtcagagtttccagcgaacttggact 120
Query: 984 tcgacgtccaagaacagctaaattctgtgtctatgtgacaataattcagtctcttttaat 1043
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcgacgtccaagaacagctaaattctgtgtctatgtgacaataattcagtctcttttaat 180
Query: 1044 tggaatcttcttcatgggtgttattttagtaactaaagactatcttggcttagtttttac 1103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tggaatcttcttcatgggtgttattttagtaactaaagactatcttggcttagtttttac 240
Query: 1104 aaacagcaagcctttgcttgaggcggtttcagaactaggaaacctccttgccgtgacaat 1163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaacagcaagcctttgcttgaggcggtttcagaactaggaaacctccttgccgtgacaat 300
Query: 1164 gattcttaacagtgttcaaccagtgatttcaggtgttgctgttggaggtgggtggcaggc 1223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gattcttaacagtgttcaaccagtgatttcaggtgttgctgttggaggtgggtggcaggc 360
Query: 1224 cctggtggcttacatcaatttaggttgctattatctgtttgggcttccactgggttatgt 1283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cctggtggcttacatcaatttaggttgctattatctgtttgggcttccactgggttatgt 420
Query: 1284 tcttggttatacagcaaatttgggggttaagggactttggggagggatgatatgtggaat 1343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tcttggttatacagcaaatttgggggttaagggactttggggagggatgatatgtggaat 480
Query: 1344 tgttctccagaccttggtgctcttgttgatactttacaaaaccaattggaacaaagaggt 1403
|||||||| |||||||||||||||||||||||||||| ||||| |||||||| |||||||
Sbjct: 481 tgttctcccgaccttggtgctcttgttgatactttaccaaacccattggaaccaagaggt 540
Query: 1404 tgaagatacatctgaacgagtaaggaaatggggtgggcaagacatccaagttgataacac 1463
|||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 541 tgaagatacatctgaacgagtaaggaaatggggtgggccagacatcccagttgataacac 600
Query: 1464 agtggcttcggcataaggt 1482
||||||||||||||||||
Sbjct: 601 cgtggcttcggcataaggt 619
>gnl|LJGI|GO025491 similar to UniRef100_A7Q9Z0 Cluster: Chromosome chr8 scaffold_68,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_68, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (36%)
Length = 601
Score = 54.0 bits (27), Expect = 3e-06
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 1166 ttcttaacagtgttcaaccagtgatttcaggtgttgctgttggaggtgggtggca 1220
||||||||||||| ||||||||| | ||||| |||||||| |||| ||||||||
Sbjct: 287 ttcttaacagtgtccaaccagtgctctcaggagttgctgtgggagcagggtggca 341