Miyakogusa Predicted Gene

Lj5g3v1988850.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1988850.1 Non Chatacterized Hit- tr|I1MPJ8|I1MPJ8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.44004 PE,64.62,0,matE:
MATE efflux family protein,Multi antimicrobial extrusion protein; MATE
EFFLUX FAMILY PROTEIN,N,CUFF.56311.1
         (1449 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC79252 weakly similar to UniRef100_A7QG48 Cluster: Chr...  1382   0.0  

>gnl|LJGI|TC79252 weakly similar to UniRef100_A7QG48 Cluster: Chromosome undetermined
           scaffold_91, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_91, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (72%)
          Length = 697

 Score = 1382 bits (697), Expect = 0.0
 Identities = 697/697 (100%)
 Strand = Plus / Plus

                                                                       
Query: 17  tgaccaaaacttcaacctcagattctgactatttggccgtgaagagcttgaaggaggcta 76
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tgaccaaaacttcaacctcagattctgactatttggccgtgaagagcttgaaggaggcta 60

                                                                       
Query: 77  actcaattttctggtcagaaacagtggtgctatggaaaatagcagtaccagctgcactaa 136
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  actcaattttctggtcagaaacagtggtgctatggaaaatagcagtaccagctgcactaa 120

                                                                       
Query: 137 ccgcactgtttcaattcttgttaaactcttccaccaccatctatgctggtcatttaggag 196
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccgcactgtttcaattcttgttaaactcttccaccaccatctatgctggtcatttaggag 180

                                                                       
Query: 197 acgctgagctctcttccatctctctctattccagtgtcatgtgtgccatctgctttgctt 256
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acgctgagctctcttccatctctctctattccagtgtcatgtgtgccatctgctttgctt 240

                                                                       
Query: 257 tgatttttgggatgtctgctgggctgggaacgctttgcgggcaagcttatggagcaggga 316
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgatttttgggatgtctgctgggctgggaacgctttgcgggcaagcttatggagcaggga 300

                                                                       
Query: 317 aagttcaatctcttggaatttacctgcaaaggtcatggattgttgcactcatccttgtta 376
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aagttcaatctcttggaatttacctgcaaaggtcatggattgttgcactcatccttgtta 360

                                                                       
Query: 377 taattctcttgcctctctatgtatatgccactccattcttaaaactactaggccaagaaa 436
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 taattctcttgcctctctatgtatatgccactccattcttaaaactactaggccaagaaa 420

                                                                       
Query: 437 atgacatagctgaactggctggccactattcaatactatccattccctatttgttttcct 496
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atgacatagctgaactggctggccactattcaatactatccattccctatttgttttcct 480

                                                                       
Query: 497 acaccatcaattatcccacccagagattccttcaggtccagagtaaggttaatgtgatca 556
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 acaccatcaattatcccacccagagattccttcaggtccagagtaaggttaatgtgatca 540

                                                                       
Query: 557 tgttcatagcatttatagccttagttatacacaatgtgcttctttaccttttcatctatg 616
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tgttcatagcatttatagccttagttatacacaatgtgcttctttaccttttcatctatg 600

                                                                       
Query: 617 tcctctcctggggtataaccggggcagctatggcttctaacctctcatcgtgggtggttg 676
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tcctctcctggggtataaccggggcagctatggcttctaacctctcatcgtgggtggttg 660

                                                
Query: 677 ctgggggtcaagttatctatgctgtgggttggtgtaa 713
           |||||||||||||||||||||||||||||||||||||
Sbjct: 661 ctgggggtcaagttatctatgctgtgggttggtgtaa 697