Miyakogusa Predicted Gene

Lj5g3v1988690.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1988690.1 Non Chatacterized Hit- tr|J3MAK4|J3MAK4_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB06G1,86.67,4e-19,coiled-coil,NULL; seg,NULL,CUFF.56425.1
         (236 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC80382                                                      305   6e-83

>gnl|LJGI|TC80382 
          Length = 1188

 Score =  305 bits (154), Expect = 6e-83
 Identities = 154/154 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggatagcatggcatgtaacaaggggcaacaagtgagaaagacgaagaagaagcaggtg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 atggatagcatggcatgtaacaaggggcaacaagtgagaaagacgaagaagaagcaggtg 654

                                                                       
Query: 61  aaagatgagttggatcgtctgaaacaggctgaaaagaaaaagaggcgcttggagaaagca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 aaagatgagttggatcgtctgaaacaggctgaaaagaaaaagaggcgcttggagaaagca 714

                                             
Query: 121 ctagctacttctgctgccatcatctctgaactgg 154
           ||||||||||||||||||||||||||||||||||
Sbjct: 715 ctagctacttctgctgccatcatctctgaactgg 748



 Score =  105 bits (53), Expect = 1e-22
 Identities = 53/53 (100%)
 Strand = Plus / Plus

                                                                
Query: 184 caacagagacttgatgaagagggtgctgcaattgctgaagctgttgctctgca 236
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 caacagagacttgatgaagagggtgctgcaattgctgaagctgttgctctgca 830