Miyakogusa Predicted Gene
- Lj5g3v1988610.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1988610.1 Non Chatacterized Hit- tr|A5BNM7|A5BNM7_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,36.15,1e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; no
description,NULL; LEURICHRPT,NULL; Leucine-rich ,CUFF.56418.1
(996 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69923 similar to UniRef100_Q1S5Q1 Cluster: Leucine-ri... 303 1e-81
gnl|LJGI|FS348582 weakly similar to UniRef100_A7QZ74 Cluster: Ch... 289 2e-77
gnl|LJGI|FS322006 weakly similar to UniRef100_A7P9S7 Cluster: Ch... 153 2e-36
>gnl|LJGI|TC69923 similar to UniRef100_Q1S5Q1 Cluster: Leucine-rich repeat; n=1;
Medicago truncatula|Rep: Leucine-rich repeat - Medicago
truncatula (Barrel medic), partial (6%)
Length = 572
Score = 303 bits (153), Expect = 1e-81
Identities = 225/249 (90%)
Strand = Plus / Plus
Query: 710 caaataaatgtcatggtgatgttttacatgaagctcctgaaagcaaaggtaatgaagaag 769
||||| |||||| ||||||| || ||| |||||||| |||||||| ||||||||| |
Sbjct: 37 caaatgaatgtcctggtgatacttcgcatcaagctcctaaaagcaaaaataatgaagatg 96
Query: 770 aagatgacaagaaagatgaggtggaaaaagtatggttctactttgtcgtagcagctggct 829
||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||
Sbjct: 97 aagatgacaagaaagataaggtggaaaaagtatggttctactttgtcatagcagttggct 156
Query: 830 ttgcaactggtttttggggagttattggcacattattgttcaagaagaattggaggcatg 889
|||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||
Sbjct: 157 ttgcaactggtttttggggagttattggaactttattgttcaagaagaaatggaggcatg 216
Query: 890 cttacttcagatgggtggaagttgtagcagacaagatttatgtggcaagtgtgttaaaag 949
||||||||||||||||||||| |||||| || ||||||||||||||| |||| | ||||
Sbjct: 217 cttacttcagatgggtggaagatgtagctgataagatttatgtggcagttgtgatcaaag 276
Query: 950 ttgcaaagc 958
|||||||||
Sbjct: 277 ttgcaaagc 285
>gnl|LJGI|FS348582 weakly similar to UniRef100_A7QZ74 Cluster: Chromosome undetermined
scaffold_265, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_265,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (12%)
Length = 429
Score = 289 bits (146), Expect = 2e-77
Identities = 179/190 (94%)
Strand = Plus / Minus
Query: 769 gaagatgacaagaaagatgaggtggaaaaagtatggttctactttgtcgtagcagctggc 828
|||||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 426 gaagatgacaagaaagataaggtggaaaaagtatggttctactttgtcatagcagttggc 367
Query: 829 tttgcaactggtttttggggagttattggcacattattgttcaagaagaattggaggcat 888
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 366 tttgcaactggtttttggggagttattggcacattattgttcaagaagacatggaggcat 307
Query: 889 gcttacttcagatgggtggaagttgtagcagacaagatttatgtggcaagtgtgttaaaa 948
|||||||||||||||||||||| |||||| |||||||||||||||||| |||| | |||
Sbjct: 306 gcttacttcagatgggtggaagatgtagctgacaagatttatgtggcagttgtgatcaaa 247
Query: 949 gttgcaaagc 958
||||||||||
Sbjct: 246 gttgcaaagc 237
>gnl|LJGI|FS322006 weakly similar to UniRef100_A7P9S7 Cluster: Chromosome chr14
scaffold_9, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_9, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (8%)
Length = 715
Score = 153 bits (77), Expect = 2e-36
Identities = 199/239 (83%), Gaps = 3/239 (1%)
Strand = Plus / Plus
Query: 2 tgtctttgagaaatatgaagaacttgttgattttggatcttggtgagaataagctttctg 61
|||||||||||||| ||||||| ||||||||||||||||||||||||||| | |||| |
Sbjct: 287 tgtctttgagaaatttgaagaatttgttgattttggatcttggtgagaatcaattttcag 346
Query: 62 gtcgtataccatcgtcatggaatggaaacaactttccttcactgcatattcttattctgc 121
| | |||||| | ||||| | ||||| |||||||||||||| ||||||| ||||
Sbjct: 347 ggagcataccacc---atggactacaaacacatttccttcactgcagattcttagactgc 403
Query: 122 gagaaaacatgctgagcggtagaattcctagccaattatgccaactcacatctttgaaaa 181
| |||||||| |||| ||||| |||||| |||||||||||||| ||||| || |||
Sbjct: 404 ggcaaaacatgttgagtggtagcattccttcacaattatgccaacttacatcactgcaaa 463
Query: 182 ttttggacctttcccttaacaaattacaaggttcaatacctttgtgcataggcaatctt 240
||||||||||||| | |||||||||| |||||||||| ||| ||||||||| ||||||
Sbjct: 464 ttttggacctttctcgtaacaaattagaaggttcaattcctcggtgcataggaaatctt 522
Score = 87.7 bits (44), Expect = 1e-16
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 365 agcttgtagtcaacttggacttgtcaaaaaacaagttggttggaaccattcccaatggaa 424
|||||||||||||| ||||||||||| ||||||| ||||||||| ||||||| |||||||
Sbjct: 644 agcttgtagtcaacatggacttgtcagaaaacaatttggttggatccattcctaatggaa 703
Query: 425 taac 428
||||
Sbjct: 704 taac 707