Miyakogusa Predicted Gene

Lj5g3v1986530.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1986530.1 tr|Q9ZTK1|Q9ZTK1_SOLLC Disease resistance protein
OS=Solanum lycopersicum GN=Cf-5 PE=4 SV=1,30.74,3e-18,RNI-like,NULL;
no description,NULL; LRR_8,NULL; LRR_4,Leucine rich repeat 4;
LRR_1,Leucine-rich repe,CUFF.56392.1
         (2049 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS322006 weakly similar to UniRef100_A7P9S7 Cluster: Ch...    86   1e-15

>gnl|LJGI|FS322006 weakly similar to UniRef100_A7P9S7 Cluster: Chromosome chr14
            scaffold_9, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr14 scaffold_9, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (8%)
          Length = 715

 Score = 85.7 bits (43), Expect = 1e-15
 Identities = 124/151 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1438 tcactccatattcttatattgcggcaaaacatgctgagtggcagcattcctaaccaacta 1497
            ||||| || ||||||| | |||||||||||||| ||||||| |||||||||   ||| ||
Sbjct: 382  tcactgcagattcttagactgcggcaaaacatgttgagtggtagcattccttcacaatta 441

                                                                        
Query: 1498 tgccagctcacatcattgaaagtcctggacctttcccttaacagattacaaggttcaata 1557
            ||||| || |||||| || || |  |||||||||| | ||||| |||| |||||||||| 
Sbjct: 442  tgccaacttacatcactgcaaattttggacctttctcgtaacaaattagaaggttcaatt 501

                                           
Query: 1558 cctttgtgcataggcaatcttacaggaatgg 1588
            |||  ||||||||| ||||||  ||||||||
Sbjct: 502  cctcggtgcataggaaatcttcaaggaatgg 532



 Score = 81.8 bits (41), Expect = 2e-14
 Identities = 53/57 (92%)
 Strand = Plus / Plus

                                                                     
Query: 1267 cttccaatgcctttgagaaatttgaagaacttgttgattttggaccttggtgagaat 1323
            |||||| || ||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 280  cttccagtgtctttgagaaatttgaagaatttgttgattttggatcttggtgagaat 336



 Score = 61.9 bits (31), Expect = 1e-08
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1738 gtagtaaacatggacttgtcaagcaacaatttggttggaactattcccaatggaataac 1796
            ||||| |||||||||||||||   ||||||||||||||| | ||||| |||||||||||
Sbjct: 649  gtagtcaacatggacttgtcagaaaacaatttggttggatccattcctaatggaataac 707