Miyakogusa Predicted Gene
- Lj5g3v1986500.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1986500.1 Non Chatacterized Hit- tr|I1LDL0|I1LDL0_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
GN=G,78.49,0,seg,NULL; no description,Tetratricopeptide-like helical;
PPR_2,Pentatricopeptide repeat; PPR,Pentatr,CUFF.56290.1
(2581 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66232 weakly similar to UniRef100_A7QGA5 Cluster: Chr... 1068 0.0
gnl|LJGI|BP074494 similar to UniRef100_A7QGA5 Cluster: Chromosom... 260 4e-68
>gnl|LJGI|TC66232 weakly similar to UniRef100_A7QGA5 Cluster: Chromosome undetermined
scaffold_91, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_91, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(25%)
Length = 801
Score = 1068 bits (539), Expect = 0.0
Identities = 752/821 (91%), Gaps = 24/821 (2%)
Strand = Plus / Plus
Query: 972 gaatgctagctcctcaattttatcattgggcctgggggaacagtttcattcacgggttat 1031
|||||||||||||||||| | |||||||||||||||| |||| |||||||||||||| ||
Sbjct: 1 gaatgctagctcctcaatct-atcattgggcctgggg-aacaatttcattcacgggtcat 58
Query: 1032 cataattggactggaggatgatatatat--gtgggaaatgcactggtggatatgtacatg 1089
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 59 cataattggactggaggatgatatatatatgtgggaaatgcactggtggatatgtacatg 118
Query: 1090 aaatgctccagcatcacaaaaggtgcagtgaaagcttttagagcgatagcctcaccaaat 1149
|||||||||| ||||| ||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 119 aaatgctccaacatca-aaaaggtgctatgaaagcttttagagtgatagcctcaccaaat 177
Query: 1150 gtcatatcttggacttctttgattgctggcttagcagaacatggatttgaaaaagaatct 1209
|| || |||||||||||||||||||||| |||||||||||||||||||||||| |||||
Sbjct: 178 gttatctcttggacttctttgattgctgctttagcagaacatggatttgaaaaataatct 237
Query: 1210 tttcagttgtttgctgagatgcaagcagcaggagtgcaaccagattcctatactctatct 1269
||| | ||||||||||||||||||||||| ||| |||||||| |||||| ||||||||||
Sbjct: 238 tttgaattgtttgctgagatgcaagcagctggaatgcaaccaaattcctttactctatct 297
Query: 1270 actgttcttgtagcttgcagcaatataaagtctcttgttcaaactatgaaactccatgga 1329
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 298 actgtccttgtagcttgcagcaatataaagtctcttgttcaaactatgaaactccatgca 357
Query: 1330 catattataaaaacaaaagcagacattgatatagctgttgggaatgctcttgtagatgct 1389
||||| |||||| ||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 358 catatcataaaatcaaaaacagacattgatatagctgt--------ctcttgtagatgct 409
Query: 1390 tatgctagagggggaatggcggaggaagcatggtctgttattggcatgatgaatcataga 1449
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 tatgctggagggggaatggcggaggaagcatggtctgttattggcatgatgaatcataga 469
Query: 1450 gatcccatcacatacacaagtttagctgcaagattaaaccagaggggcgatcatgacatg 1509
|||||| | ||||||||||||||||||||||| |||||||||||||| ||||||| ||||
Sbjct: 470 gatcccgtgacatacacaagtttagctgcaaggttaaaccagaggggagatcatggcatg 529
Query: 1510 gcattaaaaatagtgactcgcatgtgcaatgatgaggttaagatggacgaattcagcttg 1569
|||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 530 gcattataagtagtgactcgcatgtgcaatgatgaggttaagatggatgaattcagcttg 589
Query: 1570 gcgagttttctatcagctgcagctggcttagggactatgggaaccggaaagcagctacat 1629
|||||||||||||||||||||||||||||||| ||||||| ||| | |||
Sbjct: 590 gcgagttttctatcagctgcagctggcttaggaactatggaaactgaaaa---------- 639
Query: 1630 tgctattctgtcaaaacaggttttgagagatgtaactcagtttcaaacagcttagttcac 1689
|||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 640 -gctattctgtcaaatcaggttttgagagatgtaactcagtttcaaacagcttagtacac 698
Query: 1690 ttgtacagcaagtgcggtagtatgcacgatgcaaagagagctttcaaagagataactgag 1749
||| |||||||||||||||||| || ||||||||| |||| ||| |||||||||||||||
Sbjct: 699 ttgcacagcaagtgcggtagtaggcgcgatgcaaacagaggttttaaagagataactgag 758
Query: 1750 ccaaatgaagtttcatggaacggtttgatatcaggattggt 1790
||| |||||||||||||||||||||||||||||||||||||
Sbjct: 759 ccagatgaagtttcatggaacggtttgatatcaggattggt 799
>gnl|LJGI|BP074494 similar to UniRef100_A7QGA5 Cluster: Chromosome undetermined
scaffold_91, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_91, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(6%)
Length = 427
Score = 260 bits (131), Expect = 4e-68
Identities = 163/174 (93%), Gaps = 6/174 (3%)
Strand = Plus / Plus
Query: 836 aatatgatgtgtgcttgtggaccaccattatctctggatttacccaaaatttgcaggtta 895
||||||||||||||||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 260 aatatgatgtgtgcttgtggaccgccattatctctggatttac------tttgcaggtta 313
Query: 896 gagaggctgtcaatgcatttcttgatatggaattgtctggaatcctaccaaataatttta 955
|||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 314 gagaggctatcaatgcatttcttgatacggaattgtctcgaatcctaccaaataatttta 373
Query: 956 catatgctagtttattgaatgctagctcctcaattttatcattgggcctggggg 1009
|||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 374 catatgctagtttattgaatgctagctcctcaatcttatcattgggcctggggg 427