Miyakogusa Predicted Gene

Lj5g3v1961210.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1961210.1 tr|G7ID28|G7ID28_MEDTR Multidrug resistance
protein ABC transporter family OS=Medicago truncatula GN,84.38,0,no
description,NULL; seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; ABC_TM1F,ABC transpo,CUFF.56454.1
         (577 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS339047 weakly similar to UniRef100_A7QTU6 Cluster: Ch...   174   4e-43

>gnl|LJGI|FS339047 weakly similar to UniRef100_A7QTU6 Cluster: Chromosome undetermined
           scaffold_171, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_171,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (5%)
          Length = 557

 Score =  174 bits (88), Expect = 4e-43
 Identities = 130/144 (90%)
 Strand = Plus / Plus

                                                                       
Query: 20  tacaagctgctccttatcaacatttgttgacctcaagcaaagaatttcaggaacttgtga 79
           ||||||||||||||||||| ||| | |||||||||||| ||| ||||||||| || || |
Sbjct: 367 tacaagctgctccttatcaccatctattgacctcaagccaaggatttcaggatctagtca 426

                                                                       
Query: 80  atgctcacaaagagactgcgggttctgaccggcttgtggatgttacttcttcccagagac 139
           ||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 427 atgctcacaaagaaactgctggttctgaccggcttgtagatgttacttcttcccagagac 486

                                   
Query: 140 attcaagttgtggtagagagatta 163
            ||||| || ||||||||||||||
Sbjct: 487 cttcaaattctggtagagagatta 510