Miyakogusa Predicted Gene
- Lj5g3v1961200.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1961200.1 tr|G7ID28|G7ID28_MEDTR Multidrug resistance
protein ABC transporter family OS=Medicago truncatula
GN,88.33,0,P-loop containing nucleoside triphosphate hydrolases,NULL;
ABC transporter transmembrane region,ABC ,CUFF.56451.1
(1992 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70172 homologue to UniRef100_A7QTU6 Cluster: Chromoso... 896 0.0
gnl|LJGI|GO023806 similar to UniRef100_A7QTS7 Cluster: Chromosom... 359 4e-98
gnl|LJGI|FS339047 weakly similar to UniRef100_A7QTU6 Cluster: Ch... 161 2e-38
gnl|LJGI|TC67222 137 3e-31
>gnl|LJGI|TC70172 homologue to UniRef100_A7QTU6 Cluster: Chromosome undetermined
scaffold_171, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_171, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(10%)
Length = 688
Score = 896 bits (452), Expect = 0.0
Identities = 452/452 (100%)
Strand = Plus / Plus
Query: 1541 tatctcaacactctgatcaagaaatatgggaggttctgggaaagtgtcaattgcaagaag 1600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tatctcaacactctgatcaagaaatatgggaggttctgggaaagtgtcaattgcaagaag 60
Query: 1601 ctgtccaagagaaagaagggggattagactcctcagttgttgaagatggggcaaactgga 1660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgtccaagagaaagaagggggattagactcctcagttgttgaagatggggcaaactgga 120
Query: 1661 gcatgggacaaaggcagttattctgtttggggcgcgccctcctaaggagaagtaggatat 1720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcatgggacaaaggcagttattctgtttggggcgcgccctcctaaggagaagtaggatat 180
Query: 1721 tggtgctcgatgaagcgactgcttcaatcgataatgcgactgatttaattctacagaaaa 1780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tggtgctcgatgaagcgactgcttcaatcgataatgcgactgatttaattctacagaaaa 240
Query: 1781 ccattaggactgagtttgcagattgtacagtaattacagttgctcacaggattccaactg 1840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ccattaggactgagtttgcagattgtacagtaattacagttgctcacaggattccaactg 300
Query: 1841 tgatggattgcactaaggttcttgccatcagtgatggaaaactggtcgagtatgatgaac 1900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgatggattgcactaaggttcttgccatcagtgatggaaaactggtcgagtatgatgaac 360
Query: 1901 caatgaacttgatgaagagagaaggatcactgtttgggaagcttgtcaaagagtactggt 1960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 caatgaacttgatgaagagagaaggatcactgtttgggaagcttgtcaaagagtactggt 420
Query: 1961 ctcattttcagtctgcagaatctctttgaagc 1992
||||||||||||||||||||||||||||||||
Sbjct: 421 ctcattttcagtctgcagaatctctttgaagc 452
>gnl|LJGI|GO023806 similar to UniRef100_A7QTS7 Cluster: Chromosome undetermined
scaffold_171, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_171, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(9%)
Length = 733
Score = 359 bits (181), Expect = 4e-98
Identities = 307/349 (87%)
Strand = Plus / Plus
Query: 1634 cagttgttgaagatggggcaaactggagcatgggacaaaggcagttattctgtttggggc 1693
|||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 240 cagttgttgaagatggatcaaactggagcatgggacaaaggcaattattctgtttggggc 299
Query: 1694 gcgccctcctaaggagaagtaggatattggtgctcgatgaagcgactgcttcaatcgata 1753
|||| || | || |||||||||||||||||||| |||||||| ||||| || |||||||
Sbjct: 300 gcgcacttttgagaagaagtaggatattggtgctggatgaagcaactgcatcgatcgata 359
Query: 1754 atgcgactgatttaattctacagaaaaccattaggactgagtttgcagattgtacagtaa 1813
|||| |||||||| ||||| || ||||||||||||||||||||||||||||| ||||| |
Sbjct: 360 atgcaactgatttgattctgcaaaaaaccattaggactgagtttgcagattgcacagtga 419
Query: 1814 ttacagttgctcacaggattccaactgtgatggattgcactaaggttcttgccatcagtg 1873
| |||| ||| |||||||| ||||| |||||||||||||||| ||||||| | |||||||
Sbjct: 420 tcacagctgcacacaggataccaacagtgatggattgcactatggttctttcaatcagtg 479
Query: 1874 atggaaaactggtcgagtatgatgaaccaatgaacttgatgaagagagaaggatcactgt 1933
|||||||| | | ||||||||||| || | |||| ||||||||||||||||||| ||||
Sbjct: 480 atggaaaattagcggagtatgatgagccgacgaacctgatgaagagagaaggatcgctgt 539
Query: 1934 ttgggaagcttgtcaaagagtactggtctcattttcagtctgcagaatc 1982
| || | ||||| || |||||||||||||||| |||||||||||||||
Sbjct: 540 tcaggcaacttgtaaatgagtactggtctcattctcagtctgcagaatc 588
Score = 67.9 bits (34), Expect = 2e-10
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 1571 aggttctgggaaagtgtcaattgcaagaagctgtccaagagaaagaagggggattagact 1630
||||||| || || |||||||||| ||||| ||||||||| ||||||| ||| |||||||
Sbjct: 93 aggttcttgggaaatgtcaattgcgagaagttgtccaagataaagaagagggcttagact 152
Query: 1631 cctcag 1636
||||||
Sbjct: 153 cctcag 158
>gnl|LJGI|FS339047 weakly similar to UniRef100_A7QTU6 Cluster: Chromosome undetermined
scaffold_171, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_171,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (5%)
Length = 557
Score = 161 bits (81), Expect = 2e-38
Identities = 129/145 (88%)
Strand = Plus / Plus
Query: 18 cctacaagctgctccttatcaacatttgctgacctcaagcaaagaatttcaggaacttgt 77
||||||||||||||||||||| ||| | ||||||||||| ||| ||||||||| || ||
Sbjct: 365 cctacaagctgctccttatcaccatctattgacctcaagccaaggatttcaggatctagt 424
Query: 78 gaatgctcacaaagagaccgctggttctgaccggcttgtggatgttacttcttcccaggg 137
|||||||||||||| || |||||||||||||||||||| |||||||||||||||||| |
Sbjct: 425 caatgctcacaaagaaactgctggttctgaccggcttgtagatgttacttcttcccagag 484
Query: 138 acattcaaattgtgctagagagatt 162
|| |||||||| || ||||||||||
Sbjct: 485 accttcaaattctggtagagagatt 509
>gnl|LJGI|TC67222
Length = 1030
Score = 137 bits (69), Expect = 3e-31
Identities = 105/117 (89%)
Strand = Plus / Plus
Query: 1876 ggaaaactggtcgagtatgatgaaccaatgaacttgatgaagagagaaggatcactgttt 1935
|||||||| || ||||||||||| ||||||||| |||||||||||||| | | || ||
Sbjct: 627 ggaaaactagtagagtatgatgagccaatgaacctgatgaagagagaatgtttgttgctt 686
Query: 1936 gggaagcttgtcaaagagtactggtctcattttcagtctgcagaatctctttgaagc 1992
||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||
Sbjct: 687 gggaagcttgtcaaagaatactggtctcattttcagtctgcagaatctcattgaagc 743