Miyakogusa Predicted Gene
- Lj5g3v1953000.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1953000.1 tr|G7ID01|G7ID01_MEDTR Eukaryotic translation
initiation factor 5B OS=Medicago truncatula
GN=MTR_1g0,74.04,0,TRANSLATION INITIATION FACTOR IF-2,Translation
initiation factor IF- 2; TRANSLATION FACTOR,NULL; no ,CUFF.56242.1
(4140 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|CB829371 similar to UniRef100_Q8H6S8 Cluster: Translati... 928 0.0
gnl|LJGI|TC73334 weakly similar to UniRef100_A7QN08 Cluster: Chr... 729 0.0
gnl|LJGI|TC66857 similar to UniRef100_A7QN08 Cluster: Chromosome... 696 0.0
gnl|LJGI|CN825654 weakly similar to UniRef100_UPI000034F54F Clus... 694 0.0
gnl|LJGI|TC66523 similar to UniRef100_Q8H6S8 Cluster: Translatio... 341 2e-92
gnl|LJGI|TC76088 similar to UniRef100_Q0DFG2 Cluster: Os05g05926... 297 3e-79
>gnl|LJGI|CB829371 similar to UniRef100_Q8H6S8 Cluster: Translation initiation factor;
n=1; Pisum sativum|Rep: Translation initiation factor -
Pisum sativum (Garden pea), partial (18%)
Length = 540
Score = 928 bits (468), Expect = 0.0
Identities = 477/479 (99%), Gaps = 2/479 (0%)
Strand = Plus / Plus
Query: 3662 atctgtttgatcagtttaaagagtatattgacaaaattaaggaggagaaaaagatagaat 3721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atctgtttgatcagtttaaagagtatattgacaaaattaaggaggagaaaaagatagaat 60
Query: 3722 ctgcagatgaggcagtcttcccatgtgttttgaaaatcttaccgaattgcgttttcaaca 3781
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 61 ctgcagatgaggcagtcttcccatgt--tttgaaaatcttaccgaattgcgttttcaaca 118
Query: 3782 agaaggatcccattgttttgggagttgatgtccttgaaggcattgcaaaggttgggactc 3841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 agaaggatcccattgttttgggagttgatgtccttgaaggcattgcaaaggttgggactc 178
Query: 3842 caatttgtattccttccaaagagttcattgatattggtcgccttgcctccattgagaata 3901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 caatttgtattccttccaaagagttcattgatattggtcgccttgcctccattgagaata 238
Query: 3902 accataaacctgtcgattatgcgaagaaggggcagagagtagccattaagattgtcggca 3961
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 accataaacctgtcgattatgcgaagaaggggcagagagtagccattaagattgtcggca 298
Query: 3962 gcaattctgaggagcaacagaagatgtttgggaggcattttgaaattaatgatgaacttg 4021
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 gcaattctgaggagcaacagaagatgtttgggaggcattttgaaattaatgatgaacttg 358
Query: 4022 tgagccatatttcacggagatcaattgatatactcaaaactaattaccgggatgaactga 4081
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 tgagccatatttcacggagatcaattgatatactcaaaactaattaccgggatgaactga 418
Query: 4082 gtaatgaggaatggagattgctcgtggcattgaagaaacttttccagatacaatgagga 4140
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gtaatgaggaatggagattgctcgtggcattgaagaaacttttccagatacaatgagga 477
>gnl|LJGI|TC73334 weakly similar to UniRef100_A7QN08 Cluster: Chromosome undetermined
scaffold_129, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_129,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (30%)
Length = 529
Score = 729 bits (368), Expect = 0.0
Identities = 368/368 (100%)
Strand = Plus / Minus
Query: 1 atggggaggaagaagccgacagttcgagacgaagagaatccgccgcagcagggcggtgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 atggggaggaagaagccgacagttcgagacgaagagaatccgccgcagcagggcggtgga 324
Query: 61 aaatcgaagaagaaggctgtcctcatcgacgatgatgaatacgccatcggaaacgagctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 aaatcgaagaagaaggctgtcctcatcgacgatgatgaatacgccatcggaaacgagctc 264
Query: 121 tctgaggagcagccgccgccggcagacgagaagcccgccgccgcggctgggaagaagaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tctgaggagcagccgccgccggcagacgagaagcccgccgccgcggctgggaagaagaag 204
Query: 181 ggtaagaaaggtaacgctaaagctgcacaagcaaataatgatgatgatggagatgaagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 ggtaagaaaggtaacgctaaagctgcacaagcaaataatgatgatgatggagatgaagat 144
Query: 241 gatgtgcctgaagttgtgtttggtgggaagaagaaagggaagtcgaaaaagggtggtggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 gatgtgcctgaagttgtgtttggtgggaagaagaaagggaagtcgaaaaagggtggtggg 84
Query: 301 ggtagtgtgttctctgcgtccagttttggtttgcttggtgatggggaggatgaggatgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 ggtagtgtgttctctgcgtccagttttggtttgcttggtgatggggaggatgaggatgat 24
Query: 361 gatgaaga 368
||||||||
Sbjct: 23 gatgaaga 16
>gnl|LJGI|TC66857 similar to UniRef100_A7QN08 Cluster: Chromosome undetermined
scaffold_129, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_129, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(26%)
Length = 964
Score = 696 bits (351), Expect = 0.0
Identities = 351/351 (100%)
Strand = Plus / Plus
Query: 835 ataggaccaatcactttctcaggtaagaaaaagaagtcatcgaagtctttgaagaaggat 894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 ataggaccaatcactttctcaggtaagaaaaagaagtcatcgaagtctttgaagaaggat 463
Query: 895 tttagttcactgagtactgctgttcctgatgaggataatatttctgtacccgagtcagct 954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 tttagttcactgagtactgctgttcctgatgaggataatatttctgtacccgagtcagct 523
Query: 955 aaaggcggtgatgatgaggacgaggaagatgtttctttagttgcattttcgggtaaaaag 1014
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 aaaggcggtgatgatgaggacgaggaagatgtttctttagttgcattttcgggtaaaaag 583
Query: 1015 aagtcttccaaaaagaaaagcagcagtgctgctgccaaagtgagtgatggaattgggttt 1074
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 aagtcttccaaaaagaaaagcagcagtgctgctgccaaagtgagtgatggaattgggttt 643
Query: 1075 gtgagtgaaagtattgagtttgttaagcctgagcaacccagtgttggaataggtaatact 1134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 gtgagtgaaagtattgagtttgttaagcctgagcaacccagtgttggaataggtaatact 703
Query: 1135 gatgctgacaacaactccgttaacaagagtgaagaggtctctgaaacttcc 1185
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 gatgctgacaacaactccgttaacaagagtgaagaggtctctgaaacttcc 754
Score = 361 bits (182), Expect = 2e-98
Identities = 182/182 (100%)
Strand = Plus / Plus
Query: 1214 gtggaaggactgctcaagaggaggacgatctagacaagattcttgcagaacttggtgagg 1273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 gtggaaggactgctcaagaggaggacgatctagacaagattcttgcagaacttggtgagg 842
Query: 1274 ctcctcctatagcaaaacctgctgttcctccaccgcaggatgataaagttcagcctactc 1333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 843 ctcctcctatagcaaaacctgctgttcctccaccgcaggatgataaagttcagcctactc 902
Query: 1334 ctgaagtaggttctgctgctgatgcttcaggggaaaaggggggaggagaggagactgtag 1393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 903 ctgaagtaggttctgctgctgatgcttcaggggaaaaggggggaggagaggagactgtag 962
Query: 1394 ag 1395
||
Sbjct: 963 ag 964
Score = 161 bits (81), Expect = 4e-38
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 702 accagttattgctttcacggggaagaagaagtcctccaaaggaagcaagaagggtggtgc 761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 accagttattgctttcacggggaagaagaagtcctccaaaggaagcaagaagggtggtgc 330
Query: 762 tttattttcagctgcgagttt 782
|||||||||||||||||||||
Sbjct: 331 tttattttcagctgcgagttt 351
Score = 119 bits (60), Expect = 1e-25
Identities = 60/60 (100%)
Strand = Plus / Plus
Query: 567 gaagaagccatcaaagggttcgaagaaaggcggtggtagtttgttcaatgccgccgcttt 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 gaagaagccatcaaagggttcgaagaaaggcggtggtagtttgttcaatgccgccgcttt 195
>gnl|LJGI|CN825654 weakly similar to UniRef100_UPI000034F54F Cluster: eukaryotic
translation initiation factor 2 family protein / eIF-2
family protein; n=1; Arabidopsis thaliana|Rep:
eukaryotic translation initiation factor 2 family
protein / eIF-2 family protein - Arabidopsis thaliana,
partial (4%)
Length = 580
Score = 694 bits (350), Expect = 0.0
Identities = 350/350 (100%)
Strand = Plus / Plus
Query: 277 gggaagtcgaaaaagggtggtgggggtagtgtgttctctgcgtccagttttggtttgctt 336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gggaagtcgaaaaagggtggtgggggtagtgtgttctctgcgtccagttttggtttgctt 61
Query: 337 ggtgatggggaggatgaggatgatgatgaagagaaatcggagttgacgggtgaggacgag 396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ggtgatggggaggatgaggatgatgatgaagagaaatcggagttgacgggtgaggacgag 121
Query: 397 gaggatgaacaggtggttagttttgctggtaagaagaagccatcaaaggggggttcgaag 456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gaggatgaacaggtggttagttttgctggtaagaagaagccatcaaaggggggttcgaag 181
Query: 457 aaaggtggagctagtttgtttactgcttcggctttcgatgctattgatgatgagaatgat 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 aaaggtggagctagtttgtttactgcttcggctttcgatgctattgatgatgagaatgat 241
Query: 517 ggtggggaggagcaggaggaggaggaaccggttgttagttttgctggtaagaagaagcca 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ggtggggaggagcaggaggaggaggaaccggttgttagttttgctggtaagaagaagcca 301
Query: 577 tcaaagggttcgaagaaaggcggtggtagtttgttcaatgccgccgcttt 626
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tcaaagggttcgaagaaaggcggtggtagtttgttcaatgccgccgcttt 351
Score = 161 bits (81), Expect = 4e-38
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 702 accagttattgctttcacggggaagaagaagtcctccaaaggaagcaagaagggtggtgc 761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 accagttattgctttcacggggaagaagaagtcctccaaaggaagcaagaagggtggtgc 486
Query: 762 tttattttcagctgcgagttt 782
|||||||||||||||||||||
Sbjct: 487 tttattttcagctgcgagttt 507
>gnl|LJGI|TC66523 similar to UniRef100_Q8H6S8 Cluster: Translation initiation factor;
n=1; Pisum sativum|Rep: Translation initiation factor -
Pisum sativum (Garden pea), partial (7%)
Length = 725
Score = 341 bits (172), Expect = 2e-92
Identities = 175/176 (99%)
Strand = Plus / Plus
Query: 3965 attctgaggagcaacagaagatgtttgggaggcattttgaaattaatgatgaacttgtga 4024
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 attctgaggagcaacagaagatgtttgggaggcattttgaaattaatgatgaacttgtga 61
Query: 4025 gccatatttcacggagatcaattgatatactcaaaactaattaccgggatgaactgagta 4084
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gccatatttcacggagatcaattgatatactcaaaactaattaccgggatgaactgagta 121
Query: 4085 atgaggaatggagattgctcgtggcattgaagaaacttttccagatacaatgagga 4140
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 atggggaatggagattgctcgtggcattgaagaaacttttccagatacaatgagga 177
>gnl|LJGI|TC76088 similar to UniRef100_Q0DFG2 Cluster: Os05g0592600 protein; n=1; Oryza
sativa Japonica Group|Rep: Os05g0592600 protein - Oryza
sativa subsp. japonica (Rice), partial (9%)
Length = 485
Score = 297 bits (150), Expect = 3e-79
Identities = 150/150 (100%)
Strand = Plus / Plus
Query: 1451 cagctgcagcagcagctggaagtgcaccagcaaatgaaactgtagaagttaaagctgagg 1510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 cagctgcagcagcagctggaagtgcaccagcaaatgaaactgtagaagttaaagctgagg 138
Query: 1511 ttgttgaatcaaagaagaatgagtctaagactaaagcagctgacaagaaattgccaaagc 1570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 ttgttgaatcaaagaagaatgagtctaagactaaagcagctgacaagaaattgccaaagc 198
Query: 1571 atgttagggagatgcaggaagcactggctc 1600
||||||||||||||||||||||||||||||
Sbjct: 199 atgttagggagatgcaggaagcactggctc 228
Score = 186 bits (94), Expect = 8e-46
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 1764 gggtaaactgttaactggtaagcagaaagaagaacaacgccgtctggaggcaatgaggag 1823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 gggtaaactgttaactggtaagcagaaagaagaacaacgccgtctggaggcaatgaggag 451
Query: 1824 gcaaattctcagtactggggttgcaactcttcct 1857
||||||||||||||||||||||||||||||||||
Sbjct: 452 gcaaattctcagtactggggttgcaactcttcct 485