Miyakogusa Predicted Gene

Lj5g3v1950960.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1950960.1 Non Chatacterized Hit- tr|I1LDH1|I1LDH1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.48015
PE,76.92,0,PORR,Plant organelle RNA recognition domain; seg,NULL;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NU,CUFF.56233.1
         (1258 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC600167 similar to UniRef100_A7Q7C7 Cluster: Chromosom...   460   e-128

>gnl|LJGI|DC600167 similar to UniRef100_A7Q7C7 Cluster: Chromosome chr18 scaffold_59,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_59, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (12%)
          Length = 232

 Score =  460 bits (232), Expect = e-128
 Identities = 232/232 (100%)
 Strand = Plus / Plus

                                                                       
Query: 20  gaattcaccatcatctccaccccactgcatcaccacaaggacaatggctccgccgcacgt 79
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gaattcaccatcatctccaccccactgcatcaccacaaggacaatggctccgccgcacgt 60

                                                                       
Query: 80  tctgcctgtggtcatcaaagaaggacccagacctggaaacggcactctcacgcaaccggc 139
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tctgcctgtggtcatcaaagaaggacccagacctggaaacggcactctcacgcaaccggc 120

                                                                       
Query: 140 ggtgggtggtgaacaaccagatcaagaacatcatcctccgctaccctaacaacgagatcc 199
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggtgggtggtgaacaaccagatcaagaacatcatcctccgctaccctaacaacgagatcc 180

                                                               
Query: 200 ccattgaagccctccagaagaagttcaaaaccctcgatcttcaaggcaaagc 251
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccattgaagccctccagaagaagttcaaaaccctcgatcttcaaggcaaagc 232