Miyakogusa Predicted Gene
- Lj5g3v1950950.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1950950.1 Non Chatacterized Hit- tr|I1LDH0|I1LDH0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.2890
PE=,85.25,0,UIM,Ubiquitin interacting motif; seg,NULL;
Ubiquitin-interacting motif.,Ubiquitin interacting motif;,CUFF.56232.1
(1857 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61328 similar to UniRef100_A7Q7C6 Cluster: Chromosome... 1114 0.0
gnl|LJGI|CB828405 similar to UniRef100_A7Q7C6 Cluster: Chromosom... 1094 0.0
gnl|LJGI|TC65650 similar to UniRef100_A7Q7C6 Cluster: Chromosome... 835 0.0
gnl|LJGI|TC60453 similar to UniRef100_A7Q7C6 Cluster: Chromosome... 654 0.0
gnl|LJGI|BW610823 similar to UniRef100_Q4SFI4 Cluster: Chromosom... 82 1e-14
gnl|LJGI|TC70442 54 3e-06
>gnl|LJGI|TC61328 similar to UniRef100_A7Q7C6 Cluster: Chromosome chr18 scaffold_59,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_59, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 765
Score = 1114 bits (562), Expect = 0.0
Identities = 562/562 (100%)
Strand = Plus / Plus
Query: 1 atggcggatcgaggagaggaagatgacttggaaatggcgattcggatgagcatgcaggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 atggcggatcgaggagaggaagatgacttggaaatggcgattcggatgagcatgcaggag 263
Query: 61 aacccgacgccggagccgaagcggagcaagccgagggacgttgttgatggggttgtttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aacccgacgccggagccgaagcggagcaagccgagggacgttgttgatggggttgtttct 323
Query: 121 gggtcgccggaggattcgccggagtataagaccaggcggcgggagctcatggcggcggct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gggtcgccggaggattcgccggagtataagaccaggcggcgggagctcatggcggcggct 383
Query: 181 gctgagaagcggatggctgcgacgacctcttgggtttcgccttcgccgccgcaatcgcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gctgagaagcggatggctgcgacgacctcttgggtttcgccttcgccgccgcaatcgcct 443
Query: 241 gcgggtaaaggggtgataaagggtgcagaagctgggaagactgagcaggatttgcgtttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gcgggtaaaggggtgataaagggtgcagaagctgggaagactgagcaggatttgcgtttg 503
Query: 301 aaaggtggggacttgagtaaggtgctgtctgtggatgaagctaatcagttgtttgttatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aaaggtggggacttgagtaaggtgctgtctgtggatgaagctaatcagttgtttgttatg 563
Query: 361 gtgtttgggagtgaagtctcaaaagggattcttgctcaatggagcaaccagggaatcagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gtgtttgggagtgaagtctcaaaagggattcttgctcaatggagcaaccagggaatcagg 623
Query: 421 tttagctctgatcctgtgacatcaatgggcctagtgcagcatgaaggtggaccctgtggc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tttagctctgatcctgtgacatcaatgggcctagtgcagcatgaaggtggaccctgtggc 683
Query: 481 gttttggcagctatacaagcatttgtgctcaaatacattcttttcttcagtgacgagttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gttttggcagctatacaagcatttgtgctcaaatacattcttttcttcagtgacgagttg 743
Query: 541 aaagatgtatcacttatgccac 562
||||||||||||||||||||||
Sbjct: 744 aaagatgtatcacttatgccac 765
>gnl|LJGI|CB828405 similar to UniRef100_A7Q7C6 Cluster: Chromosome chr18 scaffold_59,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_59, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (30%)
Length = 552
Score = 1094 bits (552), Expect = 0.0
Identities = 552/552 (100%)
Strand = Plus / Plus
Query: 978 ggatgatcccagcctaccactggttactgctccttttgggcatgcctcccaggaaattgt 1037
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggatgatcccagcctaccactggttactgctccttttgggcatgcctcccaggaaattgt 60
Query: 1038 aaacctactgctctgtgggcaggctgtccctaatgtgtttgacggaaggatggatttagg 1097
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaacctactgctctgtgggcaggctgtccctaatgtgtttgacggaaggatggatttagg 120
Query: 1098 tgggggaatgtttctgaaaggcatatcccaaaatgtggaagttggatttctcactttgct 1157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgggggaatgtttctgaaaggcatatcccaaaatgtggaagttggatttctcactttgct 180
Query: 1158 agaatccctgaatttctgcaaggttggtcagtttctgaaatccccacaatggcctatatg 1217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agaatccctgaatttctgcaaggttggtcagtttctgaaatccccacaatggcctatatg 240
Query: 1218 ggttgttgggagtgaatcccattacacagtgctgtttgctcttgaccccagcgttcaaaa 1277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggttgttgggagtgaatcccattacacagtgctgtttgctcttgaccccagcgttcaaaa 300
Query: 1278 tgagaatgaactggaaggaagggaaactgagattcgcagagcttttgacgcacaagatca 1337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgagaatgaactggaaggaagggaaactgagattcgcagagcttttgacgcacaagatca 360
Query: 1338 gagtggaggcggtggtttcattagtgtggaagggttccatcatgttctcagagaaacaaa 1397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gagtggaggcggtggtttcattagtgtggaagggttccatcatgttctcagagaaacaaa 420
Query: 1398 tatcaaacttccgtcagataagctagatcacctttgtggtgctgggttcattgtctggag 1457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tatcaaacttccgtcagataagctagatcacctttgtggtgctgggttcattgtctggag 480
Query: 1458 cgaattctggcaagtaattttggatctagacaaaagcttgggaggtttgaaggattcatc 1517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgaattctggcaagtaattttggatctagacaaaagcttgggaggtttgaaggattcatc 540
Query: 1518 tgggttgatggg 1529
||||||||||||
Sbjct: 541 tgggttgatggg 552
>gnl|LJGI|TC65650 similar to UniRef100_A7Q7C6 Cluster: Chromosome chr18 scaffold_59,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_59, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 1084
Score = 835 bits (421), Expect = 0.0
Identities = 421/421 (100%)
Strand = Plus / Plus
Query: 1 atggcggatcgaggagaggaagatgacttggaaatggcgattcggatgagcatgcaggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 atggcggatcgaggagaggaagatgacttggaaatggcgattcggatgagcatgcaggag 335
Query: 61 aacccgacgccggagccgaagcggagcaagccgagggacgttgttgatggggttgtttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 aacccgacgccggagccgaagcggagcaagccgagggacgttgttgatggggttgtttct 395
Query: 121 gggtcgccggaggattcgccggagtataagaccaggcggcgggagctcatggcggcggct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 gggtcgccggaggattcgccggagtataagaccaggcggcgggagctcatggcggcggct 455
Query: 181 gctgagaagcggatggctgcgacgacctcttgggtttcgccttcgccgccgcaatcgcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 gctgagaagcggatggctgcgacgacctcttgggtttcgccttcgccgccgcaatcgcct 515
Query: 241 gcgggtaaaggggtgataaagggtgcagaagctgggaagactgagcaggatttgcgtttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 gcgggtaaaggggtgataaagggtgcagaagctgggaagactgagcaggatttgcgtttg 575
Query: 301 aaaggtggggacttgagtaaggtgctgtctgtggatgaagctaatcagttgtttgttatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 aaaggtggggacttgagtaaggtgctgtctgtggatgaagctaatcagttgtttgttatg 635
Query: 361 gtgtttgggagtgaagtctcaaaagggattcttgctcaatggagcaaccagggaatcagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 gtgtttgggagtgaagtctcaaaagggattcttgctcaatggagcaaccagggaatcagg 695
Query: 421 t 421
|
Sbjct: 696 t 696
>gnl|LJGI|TC60453 similar to UniRef100_A7Q7C6 Cluster: Chromosome chr18 scaffold_59,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_59, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 756
Score = 654 bits (330), Expect = 0.0
Identities = 333/334 (99%)
Strand = Plus / Plus
Query: 1524 gatgggtaagaaggtctttgatctgtaccattttaatgggattgctaaatcagatctgaa 1583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gatgggtaagaaggtctttgatctgtaccattttaatgggattgctaaatcagatctgaa 60
Query: 1584 tggcagtcaagttaatgctgggggtgaaactccattgcaaagaccccggctcacgaagtt 1643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tggcagtcaagttaatgctgggggtgaaactccattgcaaagaccccggctcacgaagtt 120
Query: 1644 gagcgtttcagttcccccaaggtggacaccggaggaattcatggcagatgtgaacgtttc 1703
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 121 gagcgtttcagttcccccaaggtggacaccggaggaattcatggcagatgtgaatgtttc 180
Query: 1704 ctctgcttccggcccaagtgattcttctgggaaggacgctgaagtatctaaaccagagcc 1763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctctgcttccggcccaagtgattcttctgggaaggacgctgaagtatctaaaccagagcc 240
Query: 1764 tactcagcatgcacctttggtggactgcataaggacgcgctggccgcgcgctgtctgcag 1823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tactcagcatgcacctttggtggactgcataaggacgcgctggccgcgcgctgtctgcag 300
Query: 1824 ctggttgggggatcctcctagtatagtctgagat 1857
||||||||||||||||||||||||||||||||||
Sbjct: 301 ctggttgggggatcctcctagtatagtctgagat 334
>gnl|LJGI|BW610823 similar to UniRef100_Q4SFI4 Cluster: Chromosome 7 SCAF14601 whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep:, partial (1%)
Length = 477
Score = 81.8 bits (41), Expect = 1e-14
Identities = 41/41 (100%)
Strand = Plus / Plus
Query: 1 atggcggatcgaggagaggaagatgacttggaaatggcgat 41
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 atggcggatcgaggagaggaagatgacttggaaatggcgat 477
>gnl|LJGI|TC70442
Length = 619
Score = 54.0 bits (27), Expect = 3e-06
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1551 ccattttaatgggattgctaaatcaga 1577
|||||||||||||||||||||||||||
Sbjct: 351 ccattttaatgggattgctaaatcaga 377