Miyakogusa Predicted Gene
- Lj5g3v1949730.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1949730.1 Non Chatacterized Hit- tr|C5Y570|C5Y570_SORBI
Putative uncharacterized protein Sb05g003910
OS=Sorghu,61.96,3e-18,DUF793,Protein BYPASS-related; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; seg,NULL,CUFF.56206.1
(1203 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58881 weakly similar to UniRef100_Q8RM91 Cluster: Tra... 678 0.0
gnl|LJGI|TC70871 similar to UniRef100_A7Q7B0 Cluster: Chromosome... 658 0.0
gnl|LJGI|TC76745 similar to UniRef100_A7Q7B0 Cluster: Chromosome... 129 4e-29
gnl|LJGI|FS320394 similar to UniRef100_A7Q7B0 Cluster: Chromosom... 113 3e-24
gnl|LJGI|TC69621 similar to UniRef100_A7Q7B0 Cluster: Chromosome... 92 1e-17
>gnl|LJGI|TC58881 weakly similar to UniRef100_Q8RM91 Cluster: Transposase; n=2;
Mycoplasma mycoides subsp. mycoides SC|Rep: Transposase
- Mycoplasma mycoides subsp. mycoides SC, partial (4%)
Length = 798
Score = 678 bits (342), Expect = 0.0
Identities = 342/342 (100%)
Strand = Plus / Plus
Query: 1 atgccagcgacggactatcaaggttcgtctccgtcgtcatcgctaactcagtttggccgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 atgccagcgacggactatcaaggttcgtctccgtcgtcatcgctaactcagtttggccgt 516
Query: 61 tcaatcttcagcaccaaccgtcgtgatcaggttcactccatggaaggtggttcaaccttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 tcaatcttcagcaccaaccgtcgtgatcaggttcactccatggaaggtggttcaaccttg 576
Query: 121 gagcatgagcttgagtcctttcagcaacatgtcactgatcggttccttgatctctcttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 gagcatgagcttgagtcctttcagcaacatgtcactgatcggttccttgatctctcttca 636
Query: 181 gctggtcctgacgatttgctctcgctttcttgggttgggaagcttcttgatcacttcctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 gctggtcctgacgatttgctctcgctttcttgggttgggaagcttcttgatcacttcctc 696
Query: 241 tcttgccaggaagagttcaaggccattctcaatgcacacaaggcacaggcgttgagaccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 tcttgccaggaagagttcaaggccattctcaatgcacacaaggcacaggcgttgagaccc 756
Query: 301 cccttggatcgaatggtcgctgactatttcgaacggagtgtc 342
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 cccttggatcgaatggtcgctgactatttcgaacggagtgtc 798
>gnl|LJGI|TC70871 similar to UniRef100_A7Q7B0 Cluster: Chromosome chr18 scaffold_59,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_59, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (28%)
Length = 765
Score = 658 bits (332), Expect = 0.0
Identities = 342/344 (99%), Gaps = 1/344 (0%)
Strand = Plus / Plus
Query: 861 gaattacac-atgggctgttccattgctctctcttcatgagaggatcttcgaggagtcga 919
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gaattacacnatgggctgttccattgctctctcttcatgagaggatcttcgaggagtcga 61
Query: 920 agaagcgggagcggaagaatgcttgtggtttgctcaaggagatttatcagattgagaaat 979
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 agaagcgggagcggaagaatgcttgtggtttgctcaaggagatttatcagattgagaaat 121
Query: 980 gtgctagggccatgaatgaattggctgattctgtgcagttcccattgacagaggagaggg 1039
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gtgctagggccatgaatgaattggctgattctgtgcagttcccattgacagaggagaggg 181
Query: 1040 aaggggaagttaggaagagagtgcaggaggtttcacaagtttgtgatgctttgaaggatg 1099
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 aaggggaatttaggaagagagtgcaggaggtttcacaagtttgtgatgctttgaaggatg 241
Query: 1100 gacttgatcctctggagcgccaagtgcgggaggttttccatagaattgttcgcagccgaa 1159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gacttgatcctctggagcgccaagtgcgggaggttttccatagaattgttcgcagccgaa 301
Query: 1160 cggaagggcttgactctcttggaaggccaaacaatgctgagtaa 1203
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 cggaagggcttgactctcttggaaggccaaacaatgctgagtaa 345
>gnl|LJGI|TC76745 similar to UniRef100_A7Q7B0 Cluster: Chromosome chr18 scaffold_59,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_59, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (43%)
Length = 633
Score = 129 bits (65), Expect = 4e-29
Identities = 195/236 (82%), Gaps = 3/236 (1%)
Strand = Plus / Plus
Query: 299 cccccttggatcgaatggtcgctgactatttcgaacggagtgtcaaggctttggatgttt 358
|||| |||||||| ||||| | ||| | ||||| |||||||| ||||| ||||||||||
Sbjct: 161 cccctttggatcgcatggtgggtgatttcttcgagcggagtgtgaaggcgttggatgttt 220
Query: 359 gtaatgcaattcgtgatgggattgagcagattcgtcaatggcagaagctcttagagattg 418
|||| ||||| ||||||||||||||||||||| | |||||| |||||||||| |||||||
Sbjct: 221 gtaacgcaatccgtgatgggattgagcagattaggcaatggaagaagctcttggagattg 280
Query: 419 tgctctttgcattaggggggaatcagagaagcattggtgagggtcaatttcgtagagcga 478
| || | ||| || | ||| | |||| ||||||||||||||||||||| | || |
Sbjct: 281 ttctatgtgctttggatcagaa--aaagaa-cattggtgagggtcaatttcgccgggcca 337
Query: 479 agaaggctctcattgatttggcaattgggatgcttgatgataaggattccaatgct 534
| |||||||| ||||||| || ||||||||||| ||||| |||||||| ||||||
Sbjct: 338 aaaaggctcttgttgatttagctattgggatgctagatgacaaggattctaatgct 393
Score = 63.9 bits (32), Expect = 2e-09
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 634 tttcggtcactttcatggagtgtttctcgtacttggtctgctgcaagacagctccaagca 693
||||| || |||||||||||||| || || | |||||||||||| || || || ||||||
Sbjct: 505 tttcgatcgctttcatggagtgtctcgcggaattggtctgctgcgaggcaactacaagca 564
Query: 694 attgggaacaac 705
||||||||||||
Sbjct: 565 attgggaacaac 576
>gnl|LJGI|FS320394 similar to UniRef100_A7Q7B0 Cluster: Chromosome chr18 scaffold_59,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_59, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (28%)
Length = 776
Score = 113 bits (57), Expect = 3e-24
Identities = 105/121 (86%)
Strand = Plus / Plus
Query: 299 cccccttggatcgaatggtcgctgactatttcgaacggagtgtcaaggctttggatgttt 358
|||| |||||||| ||||| | ||| | ||||| |||||||| ||||| ||||||||||
Sbjct: 599 cccctttggatcgcatggtgggtgatttcttcgagcggagtgtgaaggcgttggatgttt 658
Query: 359 gtaatgcaattcgtgatgggattgagcagattcgtcaatggcagaagctcttagagattg 418
|||| ||||| ||||||||||||||||||||| | |||||| |||||||||| |||||||
Sbjct: 659 gtaacgcaatccgtgatgggattgagcagattaggcaatggaagaagctcttggagattg 718
Query: 419 t 419
|
Sbjct: 719 t 719
>gnl|LJGI|TC69621 similar to UniRef100_A7Q7B0 Cluster: Chromosome chr18 scaffold_59,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_59, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 642
Score = 91.7 bits (46), Expect = 1e-17
Identities = 130/158 (82%)
Strand = Plus / Plus
Query: 910 gaggagtcgaagaagcgggagcggaagaatgcttgtggtttgctcaaggagatttatcag 969
|||||||||| |||| ||||| |||||||| ||||||| || | | ||||||| | |||
Sbjct: 97 gaggagtcgaggaagagggagaggaagaattcttgtgggctgatgagggagattcagcag 156
Query: 970 attgagaaatgtgctagggccatgaatgaattggctgattctgtgcagttcccattgaca 1029
|||||||| ||||||||||| |||||||| |||| |||||||||||||| || ||||
Sbjct: 157 attgagaagtgtgctagggcgatgaatgagttgggggattctgtgcagtttcctttgagt 216
Query: 1030 gaggagagggaaggggaagttaggaagagagtgcagga 1067
||| ||| || | ||| |||||| | |||||||||||
Sbjct: 217 gagaagaaagaggaggaggttaggcatagagtgcagga 254