Miyakogusa Predicted Gene
- Lj5g3v1949500.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1949500.1 tr|F2DTP1|F2DTP1_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2 SV=1,32.85,5e-19,OS12G0152900
PROTEIN (FRAGMENT),NULL; CAMP-RESPONSE ELEMENT BINDING
PROTEIN-RELATED,NULL; basic regi,CUFF.56204.1
(729 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59124 similar to UniRef100_A7Q7A7 Cluster: Chromosome... 1445 0.0
gnl|LJGI|DC595459 weakly similar to UniRef100_A7Q7A7 Cluster: Ch... 585 e-166
gnl|LJGI|TC71671 similar to UniRef100_A4ZGU1 Cluster: Transcript... 105 4e-22
gnl|LJGI|TC64939 similar to UniRef100_A7Q6S2 Cluster: Chromosome... 94 1e-18
gnl|LJGI|BG662320 64 1e-09
gnl|LJGI|TC70312 similar to UniRef100_A3FM74 Cluster: Abscisic a... 62 5e-09
>gnl|LJGI|TC59124 similar to UniRef100_A7Q7A7 Cluster: Chromosome chr18 scaffold_59,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_59, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (52%)
Length = 1267
Score = 1445 bits (729), Expect = 0.0
Identities = 729/729 (100%)
Strand = Plus / Plus
Query: 1 atggcgtcgtcgaagatgatgatgtcgtcttccaaatcattggatcatcaacaaccctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 atggcgtcgtcgaagatgatgatgtcgtcttccaaatcattggatcatcaacaaccctct 167
Query: 61 tctcctcctccttcttccatgccccaattcaccaccaccaacttcatcgaccacgccgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 tctcctcctccttcttccatgccccaattcaccaccaccaacttcatcgaccacgccgat 227
Query: 121 tccactctcaccgatccctacgtccccagaaccgtcgacgacgtctggcaggagatcatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 tccactctcaccgatccctacgtccccagaaccgtcgacgacgtctggcaggagatcatc 287
Query: 181 gccggcgaccaccaccagtgcaaggaggagatccccgacgagatgatgactctcgaggat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 gccggcgaccaccaccagtgcaaggaggagatccccgacgagatgatgactctcgaggat 347
Query: 241 ttccttgttaaggccggcgcagtcgacggcgacgacgaagatgatgaggtcaagatgtct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 ttccttgttaaggccggcgcagtcgacggcgacgacgaagatgatgaggtcaagatgtct 407
Query: 301 atgcctctgactgagaggctcagcggcgtgttttcgcttgatggttcttcgtttcagggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 atgcctctgactgagaggctcagcggcgtgttttcgcttgatggttcttcgtttcagggg 467
Query: 361 atggagggtgttgaaggtgggtcggcgtcggtgggtgggtttgggaatggggttgaggtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 atggagggtgttgaaggtgggtcggcgtcggtgggtgggtttgggaatggggttgaggtg 527
Query: 421 gttgaaggaacgagagggaagagggggaggcctgttgtggagaatttggataaggctgcg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 gttgaaggaacgagagggaagagggggaggcctgttgtggagaatttggataaggctgcg 587
Query: 481 cagcagagacagaggaggatgatcaagaacagagaatcagctgctaggtctagggaacgc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 cagcagagacagaggaggatgatcaagaacagagaatcagctgctaggtctagggaacgc 647
Query: 541 aagcaggcttaccaagttgaattggagtccttggcggtgaagctagaggaggaaaatgac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 aagcaggcttaccaagttgaattggagtccttggcggtgaagctagaggaggaaaatgac 707
Query: 601 aagttgttgaaggaaaaggctgagagaacaaaggagaggttcaaacagcttatggaagaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 aagttgttgaaggaaaaggctgagagaacaaaggagaggttcaaacagcttatggaagaa 767
Query: 661 gtgatccctgttgtagagaagcgaaggccaccacgtccgctccgaaggattaactccatg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 gtgatccctgttgtagagaagcgaaggccaccacgtccgctccgaaggattaactccatg 827
Query: 721 cagtggtag 729
|||||||||
Sbjct: 828 cagtggtag 836
>gnl|LJGI|DC595459 weakly similar to UniRef100_A7Q7A7 Cluster: Chromosome chr18
scaffold_59, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_59, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (12%)
Length = 404
Score = 585 bits (295), Expect = e-166
Identities = 326/335 (97%), Gaps = 1/335 (0%)
Strand = Plus / Plus
Query: 1 atggcgtcgtcgaagatgatgatgtcgtcttccaaatcattggatcatcaacaaccctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 atggcgtcgtcgaagatgatgatgtcgtcttccaaatcattggatcatcaacaaccctct 129
Query: 61 tctcctcctccttctt-ccatgccccaattcaccaccaccaacttcatcgaccacgccga 119
|||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 tctcctccgggggggggccatgccccaattcaccaccaccaacttcatcgaccacgccga 189
Query: 120 ttccactctcaccgatccctacgtccccagaaccgtcgacgacgtctggcaggagatcat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 ttccactctcaccgatccctacgtccccagaaccgtcgacgacgtctggcaggagatcat 249
Query: 180 cgccggcgaccaccaccagtgcaaggaggagatccccgacgagatgatgactctcgagga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 cgccggcgaccaccaccagtgcaaggaggagatccccgacgagatgatgactctcgagga 309
Query: 240 tttccttgttaaggccggcgcagtcgacggcgacgacgaagatgatgaggtcaagatgtc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tttccttgttaaggccggcgcagtcgacggcgacgacgaagatgatgaggtcaagatgtc 369
Query: 300 tatgcctctgactgagaggctcagcggcgtgtttt 334
|||||||||||||||||||||||||||||||||||
Sbjct: 370 tatgcctctgactgagaggctcagcggcgtgtttt 404
>gnl|LJGI|TC71671 similar to UniRef100_A4ZGU1 Cluster: Transcription factor bZIP10;
n=1; Glycine max|Rep: Transcription factor bZIP10 -
Glycine max (Soybean), partial (45%)
Length = 644
Score = 105 bits (53), Expect = 4e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 484 cagagacagaggaggatgatcaagaacagagaatcagctgctaggtctagggaacgcaag 543
|||| |||||||||||||||||||||||||||||| ||||||||||| || |||||||||
Sbjct: 311 cagaaacagaggaggatgatcaagaacagagaatctgctgctaggtccagagaacgcaag 370
Query: 544 caggcttac 552
|||||||||
Sbjct: 371 caggcttac 379
>gnl|LJGI|TC64939 similar to UniRef100_A7Q6S2 Cluster: Chromosome chr12 scaffold_57,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_57, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 835
Score = 93.7 bits (47), Expect = 1e-18
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 489 acagaggaggatgatcaagaacagagaatcagctgctaggtctagggaacgcaagcagg 547
|||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||
Sbjct: 315 acagaggaggatgatcaagaacagagaatctgctgctaggtccagagaacgcaagcagg 373
>gnl|LJGI|BG662320
Length = 284
Score = 63.9 bits (32), Expect = 1e-09
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 617 aggctgagagaacaaaggagaggttcaaacag 648
||||||||||||||||||||||||||||||||
Sbjct: 200 aggctgagagaacaaaggagaggttcaaacag 231
>gnl|LJGI|TC70312 similar to UniRef100_A3FM74 Cluster: Abscisic acid responsive
elements-binding protein 2; n=1; Populus trichocarpa|Rep:
Abscisic acid responsive elements-binding protein 2 -
Populus trichocarpa (Western balsam poplar) (Populus
balsamiferasubsp. trichocarpa), partial (48%)
Length = 1812
Score = 61.9 bits (31), Expect = 5e-09
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 486 gagacagaggaggatgatcaagaacagagaatcagctgctaggtctagggaacgcaagca 545
|||||| |||||||||||||| || |||||||||||||| ||||| ||| ||||||||
Sbjct: 1228 gagacaaaggaggatgatcaaaaatagagaatcagctgccaggtcacgggctcgcaagca 1287
Query: 546 ggc 548
|||
Sbjct: 1288 ggc 1290