Miyakogusa Predicted Gene

Lj5g3v1915180.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1915180.1 Non Chatacterized Hit- tr|D3GDL2|D3GDL2_CAMSI
Putative one-helix protein OS=Camellia sinensis PE=2
S,100,0.000000000003, ,CUFF.56174.1
         (110 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV767793 similar to UniRef100_A9Z0U6 Cluster: One-helix...   218   5e-57
gnl|LJGI|TC65905 similar to UniRef100_A7Q773 Cluster: Chromosome...   218   5e-57
gnl|LJGI|GO011601 similar to UniRef100_A7Q773 Cluster: Chromosom...   151   9e-37

>gnl|LJGI|AV767793 similar to UniRef100_A9Z0U6 Cluster: One-helix protein; n=1;
           Ipomoea nil|Rep: One-helix protein - Ipomoea nil
           (Japanese morning glory) (Pharbitis nil), partial (49%)
          Length = 556

 Score =  218 bits (110), Expect = 5e-57
 Identities = 110/110 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgtttggttttgctgttgggatgctaacagagtatgcaactggctctgactttgttgat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 atgtttggttttgctgttgggatgctaacagagtatgcaactggctctgactttgttgat 220

                                                             
Query: 61  caagtcaagatccttctctcgaattttgggatagtagatttggaatgaaa 110
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 caagtcaagatccttctctcgaattttgggatagtagatttggaatgaaa 170


>gnl|LJGI|TC65905 similar to UniRef100_A7Q773 Cluster: Chromosome chr18 scaffold_59,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_59, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (69%)
          Length = 796

 Score =  218 bits (110), Expect = 5e-57
 Identities = 110/110 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtttggttttgctgttgggatgctaacagagtatgcaactggctctgactttgttgat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 atgtttggttttgctgttgggatgctaacagagtatgcaactggctctgactttgttgat 636

                                                             
Query: 61  caagtcaagatccttctctcgaattttgggatagtagatttggaatgaaa 110
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 caagtcaagatccttctctcgaattttgggatagtagatttggaatgaaa 686


>gnl|LJGI|GO011601 similar to UniRef100_A7Q773 Cluster: Chromosome chr18 scaffold_59,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_59, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (67%)
          Length = 635

 Score =  151 bits (76), Expect = 9e-37
 Identities = 100/108 (92%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtttggttttgctgttgggatgctaacagagtatgcaactggctctgactttgttgat 60
           ||||| ||||||||||||||| |||| |||||||||||||| ||||| ||||||||||||
Sbjct: 366 atgttcggttttgctgttgggttgctgacagagtatgcaacaggctcagactttgttgat 425

                                                           
Query: 61  caagtcaagatccttctctcgaattttgggatagtagatttggaatga 108
           ||||| |||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 426 caagtaaagatccttctctcaaattttgggataatagatttggaatga 473