Miyakogusa Predicted Gene

Lj5g3v1914170.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1914170.1 Non Chatacterized Hit- tr|I1NH47|I1NH47_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,70.37,0.00000000009,seg,NULL,CUFF.56173.1
         (235 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC65905 similar to UniRef100_A7Q773 Cluster: Chromosome...   466   e-131
gnl|LJGI|AV767793 similar to UniRef100_A9Z0U6 Cluster: One-helix...   123   5e-28

>gnl|LJGI|TC65905 similar to UniRef100_A7Q773 Cluster: Chromosome chr18 scaffold_59,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_59, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (69%)
          Length = 796

 Score =  466 bits (235), Expect = e-131
 Identities = 235/235 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtctgtgacatcttcatacccatgcatcaaaatcccagcatgttccacttcttcatca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 atgtctgtgacatcttcatacccatgcatcaaaatcccagcatgttccacttcttcatca 186

                                                                       
Query: 61  tgctcatcatcatcaacttcctcctataactctttcagattctcttcctgcaagccttat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 tgctcatcatcatcaacttcctcctataactctttcagattctcttcctgcaagccttat 246

                                                                       
Query: 121 gctgttgttgttactataaggaattctcagactgaagggcctataagaagaccagtggtc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 gctgttgttgttactataaggaattctcagactgaagggcctataagaagaccagtggtc 306

                                                                  
Query: 181 agagaaccatcatcaagtgttcctcagctgcagaagccatcacctccttctcagc 235
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 agagaaccatcatcaagtgttcctcagctgcagaagccatcacctccttctcagc 361


>gnl|LJGI|AV767793 similar to UniRef100_A9Z0U6 Cluster: One-helix protein; n=1;
           Ipomoea nil|Rep: One-helix protein - Ipomoea nil
           (Japanese morning glory) (Pharbitis nil), partial (49%)
          Length = 556

 Score =  123 bits (62), Expect = 5e-28
 Identities = 62/62 (100%)
 Strand = Plus / Minus

                                                                       
Query: 174 agtggtcagagaaccatcatcaagtgttcctcagctgcagaagccatcacctccttctca 233
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 agtggtcagagaaccatcatcaagtgttcctcagctgcagaagccatcacctccttctca 497

             
Query: 234 gc 235
           ||
Sbjct: 496 gc 495