Miyakogusa Predicted Gene

Lj5g3v1914150.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1914150.1 Non Chatacterized Hit- tr|J7I1Z2|J7I1Z2_ORYRU
Uncharacterized protein OS=Oryza rufipogon PE=4
SV=1,54.84,8e-17,seg,NULL,CUFF.56175.1
         (579 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC80577 similar to UniRef100_Q5ZC72 Cluster: Light stre...   476   e-134
gnl|LJGI|TC75654 similar to UniRef100_O80544 Cluster: T22J18.4; ...   143   1e-33
gnl|LJGI|GO032833 similar to UniRef100_O80544 Cluster: T22J18.4;...   119   2e-26

>gnl|LJGI|TC80577 similar to UniRef100_Q5ZC72 Cluster: Light stress-responsive
           one-helix protein-like; n=1; Oryza sativa Japonica
           Group|Rep: Light stress-responsive one-helix
           protein-like - Oryza sativa subsp. japonica (Rice),
           partial (9%)
          Length = 527

 Score =  476 bits (240), Expect = e-134
 Identities = 240/240 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgttattggcagtagagggaggaggattcttctctgcttcggcgtcggggtatagtaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 atgttattggcagtagagggaggaggattcttctctgcttcggcgtcggggtatagtaag 347

                                                                       
Query: 61  ggcctgagccttctgctattgggtcagagggatgaggataaacccatgagagttgcgccg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 ggcctgagccttctgctattgggtcagagggatgaggataaacccatgagagttgcgccg 407

                                                                       
Query: 121 tggaaccagtaccagttggtggaccaagaatctgaccctgaccctcagctccagctggct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 tggaaccagtaccagttggtggaccaagaatctgaccctgaccctcagctccagctggct 467

                                                                       
Query: 181 tcaacaaagaaccgcctctcccgcgggtgtgcttcctttgtttgctttggtcgcacttcc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 tcaacaaagaaccgcctctcccgcgggtgtgcttcctttgtttgctttggtcgcacttcc 527


>gnl|LJGI|TC75654 similar to UniRef100_O80544 Cluster: T22J18.4; n=1; Arabidopsis
           thaliana|Rep: T22J18.4 - Arabidopsis thaliana (Mouse-ear
           cress), partial (18%)
          Length = 788

 Score =  143 bits (72), Expect = 1e-33
 Identities = 126/144 (87%)
 Strand = Plus / Plus

                                                                       
Query: 167 agctccagctggcttcaacaaagaaccgcctctcccgcgggtgtgcttcctttgtttgct 226
           ||||||| |||||||| |||||||| | |||||||||| |||| ||||||||||||||||
Sbjct: 130 agctccaactggcttctacaaagaagcacctctcccgcaggtgcgcttcctttgtttgct 189

                                                                       
Query: 227 ttggtcgcacttccgcagggctcgacactccgtctccgcttaaagtgggccctgcccagc 286
           |||||||| | || |||||||| |||||||  ||||  |||||||||||||||||||| |
Sbjct: 190 ttggtcgcgcctctgcagggcttgacactcaatctcatcttaaagtgggccctgcccaac 249

                                   
Query: 287 agcctgatgtctctccagggcctc 310
           | | ||||||||| ||||||||||
Sbjct: 250 atcatgatgtctcaccagggcctc 273



 Score =  119 bits (60), Expect = 2e-26
 Identities = 72/76 (94%)
 Strand = Plus / Plus

                                                                       
Query: 496 gagagaaggaaagtgcagtggacagattcttgtggtagtgagcttgttgaaatacgagaa 555
           |||||||| |||||||| ||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 444 gagagaagaaaagtgcactggacagatgcttgtggtagtgagcttgttgaaataagagaa 503

                           
Query: 556 tttgagcccagtgaag 571
           ||||||||||||||||
Sbjct: 504 tttgagcccagtgaag 519



 Score = 87.7 bits (44), Expect = 7e-17
 Identities = 65/72 (90%)
 Strand = Plus / Plus

                                                                      
Query: 19 ggaggaggattcttctctgcttcggcgtcggggtatagtaagggcctgagccttctgcta 78
          |||||||||||||||||| |||| || || ||||||||||||||| |||||||||| || 
Sbjct: 5  ggaggaggattcttctcttcttcagcttcagggtatagtaagggcttgagccttctcctc 64

                      
Query: 79 ttgggtcagagg 90
          ||||||||||||
Sbjct: 65 ttgggtcagagg 76


>gnl|LJGI|GO032833 similar to UniRef100_O80544 Cluster: T22J18.4; n=1; Arabidopsis
           thaliana|Rep: T22J18.4 - Arabidopsis thaliana (Mouse-ear
           cress), partial (8%)
          Length = 708

 Score =  119 bits (60), Expect = 2e-26
 Identities = 72/76 (94%)
 Strand = Plus / Plus

                                                                       
Query: 496 gagagaaggaaagtgcagtggacagattcttgtggtagtgagcttgttgaaatacgagaa 555
           |||||||| |||||||| ||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 484 gagagaagaaaagtgcactggacagatgcttgtggtagtgagcttgttgaaataagagaa 543

                           
Query: 556 tttgagcccagtgaag 571
           ||||||||||||||||
Sbjct: 544 tttgagcccagtgaag 559



 Score = 87.7 bits (44), Expect = 7e-17
 Identities = 65/72 (90%)
 Strand = Plus / Plus

                                                                       
Query: 19  ggaggaggattcttctctgcttcggcgtcggggtatagtaagggcctgagccttctgcta 78
           |||||||||||||||||| |||| || || ||||||||||||||| |||||||||| || 
Sbjct: 143 ggaggaggattcttctcttcttcagcttcagggtatagtaagggcttgagccttctcctc 202

                       
Query: 79  ttgggtcagagg 90
           ||||||||||||
Sbjct: 203 ttgggtcagagg 214