Miyakogusa Predicted Gene
- Lj5g3v1914060.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1914060.1 tr|G7JX91|G7JX91_MEDTR F-box/kelch-repeat protein
OS=Medicago truncatula GN=MTR_5g057710 PE=4 SV=1,31.58,0.1,seg,NULL;
F-box,F-box domain, cyclin-like; FBA_1,F-box associated domain, type
1; SUBFAMILY NOT NAME,gene.g62554.t1.1
(1054 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74176 similar to UniRef100_A7Q9Q9 Cluster: Chromosome... 163 3e-39
gnl|LJGI|TC81178 82 8e-15
gnl|LJGI|TC80995 weakly similar to UniRef100_A7PQD5 Cluster: Chr... 68 1e-10
gnl|LJGI|DC594273 weakly similar to UniRef100_A7Q9Q9 Cluster: Ch... 66 5e-10
gnl|LJGI|TC80229 similar to UniRef100_A9XI08 Cluster: Class S F-... 58 1e-07
>gnl|LJGI|TC74176 similar to UniRef100_A7Q9Q9 Cluster: Chromosome chr5 scaffold_67,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_67, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 496
Score = 163 bits (82), Expect = 3e-39
Identities = 148/170 (87%)
Strand = Plus / Plus
Query: 38 tcttaccaaaagaattgatcgccgagatcctcgttaggcttccggttagatctcttcttc 97
|||||||| | ||| | ||||||||||| ||| |||||||||||| | ||| ||||| |
Sbjct: 130 tcttaccagaggaactcatcgccgagattctccataggcttccggtgaaatcccttctgc 189
Query: 98 aattcagatgtgtgtgcaaatcctggaaagccctaatctccagtccccaattcgtgaagg 157
||||||| || || ||||||||||||||| |||||||||||| ||||||||||| |||||
Sbjct: 190 aattcaggtgcgtctgcaaatcctggaaaaccctaatctccaatccccaattcgcgaagg 249
Query: 158 aacaccttcacaactcaatctccgatacaagcttaacacaccaacgattg 207
| ||||||| || |||||||||| ||||||||||||| ||||||||||||
Sbjct: 250 accaccttcgcatctcaatctccaatacaagcttaacccaccaacgattg 299
>gnl|LJGI|TC81178
Length = 1336
Score = 81.8 bits (41), Expect = 8e-15
Identities = 136/167 (81%), Gaps = 3/167 (1%)
Strand = Plus / Plus
Query: 243 aacatgttcactgcagtcaatattcgaaaacccatcagcccctctagaaaccctcacctt 302
|||||||||| |||||||| | |||||||||||||||||||||| |||| || | |||
Sbjct: 402 aacatgttcagtgcagtcattgttcgaaaacccatcagcccctccggaaatacttagctt 461
Query: 303 cccggtggagccccagacctattattttattgtaggttcatgtaatgggttgatctgttt 362
| ||||||| || || | | ||| ||||||||||||||| ||||| |||| |||||
Sbjct: 462 cagggtggagtccaagcaccaatat---attgtaggttcatgttatgggctgatgtgttt 518
Query: 363 gtctaattgtgatggttatttcatattgtggaacccttctactagat 409
|| | || | | |||||||||| ||||||||||||||||||||||
Sbjct: 519 gtgtgatcataacggttatttcaggttgtggaacccttctactagat 565
Score = 67.9 bits (34), Expect = 1e-10
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 543 tgagactagagttcatacctttggtacgaattcttggacaac 584
||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 675 tgagactagagttcatacctttggtaccaattgttggacaac 716
Score = 60.0 bits (30), Expect = 3e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 810 tgtgtggatgatgaaaagatatggcattcacgagtcttggac 851
||||||| ||||||||| |||||||||||| |||||||||||
Sbjct: 960 tgtgtggttgatgaaaaaatatggcattcaagagtcttggac 1001
Score = 52.0 bits (26), Expect = 7e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 472 ggcttcggctatgatcaagttaacaacaagtacaaggtgcta 513
||||| || |||||||||||||| |||||||||||||||||
Sbjct: 619 ggctttggttatgatcaagttaatgacaagtacaaggtgcta 660
>gnl|LJGI|TC80995 weakly similar to UniRef100_A7PQD5 Cluster: Chromosome chr18
scaffold_24, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_24, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (12%)
Length = 1343
Score = 67.9 bits (34), Expect = 1e-10
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 674 atgtgattatttcttttgatctagagaaggagacttatggtgaagtgttg 723
|||| |||||||| |||||||| ||||||||||| |||||||||||||||
Sbjct: 742 atgttattatttcctttgatctggagaaggagacctatggtgaagtgttg 791
>gnl|LJGI|DC594273 weakly similar to UniRef100_A7Q9Q9 Cluster: Chromosome chr5
scaffold_67, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_67, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (10%)
Length = 578
Score = 65.9 bits (33), Expect = 5e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 475 ttcggctatgatcaagttaacaacaagtacaaggtgctaat 515
||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 438 ttcggttatgatcaagttaacaacaagtacaaagtgctaat 478
Score = 60.0 bits (30), Expect = 3e-08
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 99 attcagatgtgtgtgcaaatcctggaaagccctaatctccagtccccaattcgt 152
|||||| || || |||||||| |||||| ||||||| |||||||||||||||||
Sbjct: 65 attcaggtgcgtctgcaaatcatggaaaaccctaatttccagtccccaattcgt 118
>gnl|LJGI|TC80229 similar to UniRef100_A9XI08 Cluster: Class S F-box protein; n=1;
Nicotiana alata|Rep: Class S F-box protein - Nicotiana
alata (Winged tobacco) (Persian tobacco), partial (5%)
Length = 692
Score = 58.0 bits (29), Expect = 1e-07
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 676 gtgattatttcttttgatctagagaaggagacttatggtgaagtgttgttacctcct 732
||||||||||||||||| | || || |||||| |||||||||||||| ||||||||
Sbjct: 10 gtgattatttcttttgacgtggaaaaagagactcatggtgaagtgttgctacctcct 66