Miyakogusa Predicted Gene
- Lj5g3v1914050.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1914050.1 Non Chatacterized Hit- tr|I1N283|I1N283_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,34.65,4e-19,F_box_assoc_1: F-box protein interaction domain,F-box
associated interaction domain; FBOX,F-box doma,CUFF.56157.1
(679 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74176 similar to UniRef100_A7Q9Q9 Cluster: Chromosome... 182 2e-45
gnl|LJGI|TC81178 100 2e-20
gnl|LJGI|DC594273 weakly similar to UniRef100_A7Q9Q9 Cluster: Ch... 88 8e-17
gnl|LJGI|TC80995 weakly similar to UniRef100_A7PQD5 Cluster: Chr... 82 5e-15
gnl|LJGI|TC60244 weakly similar to UniRef100_Q2HS67 Cluster: Cyc... 78 8e-14
gnl|LJGI|FS324043 weakly similar to UniRef100_Q2HWB4 Cluster: Cy... 52 5e-06
gnl|LJGI|BW626991 weakly similar to UniRef100_A7PQD5 Cluster: Ch... 52 5e-06
gnl|LJGI|TC73199 weakly similar to UniRef100_Q2HS67 Cluster: Cyc... 52 5e-06
gnl|LJGI|TC65255 similar to UniRef100_Q2HWB4 Cluster: Cyclin-lik... 52 5e-06
gnl|LJGI|TC57901 similar to UniRef100_A2Q2H0 Cluster: F-box prot... 52 5e-06
>gnl|LJGI|TC74176 similar to UniRef100_A7Q9Q9 Cluster: Chromosome chr5 scaffold_67,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_67, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 496
Score = 182 bits (92), Expect = 2e-45
Identities = 190/222 (85%), Gaps = 3/222 (1%)
Strand = Plus / Plus
Query: 1 atgaggcaaccacgcccacggttgctgtcgccgccgt---tcttaccggaggaactgttg 57
||||||||||| || ||||||||| ||||||||||| ||||||| |||||||| |
Sbjct: 90 atgaggcaaccgcgtccacggttgttgtcgccgccggcggtcttaccagaggaactcatc 149
Query: 58 ggggagatcctcctcaggcttctggcgagatctcttcttcaattcaagtgcgtgtgcaaa 117
| ||||| |||| ||||||| || || ||| ||||| ||||||| |||||| ||||||
Sbjct: 150 gccgagattctccataggcttccggtgaaatcccttctgcaattcaggtgcgtctgcaaa 209
Query: 118 tcatggaaaaccctaatctccagtccccaattcgtgaaggaccaccttcgcatctcaatc 177
|| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 210 tcctggaaaaccctaatctccaatccccaattcgcgaaggaccaccttcgcatctcaatc 269
Query: 178 tccaatacaagcactacccaccaacaattggtctatttcacc 219
|||||||||||| |||||||||| ||||| || |||||||
Sbjct: 270 tccaatacaagcttaacccaccaacgattggcctctttcacc 311
>gnl|LJGI|TC81178
Length = 1336
Score = 99.6 bits (50), Expect = 2e-20
Identities = 257/326 (78%)
Strand = Plus / Plus
Query: 84 gagatctcttcttcaattcaagtgcgtgtgcaaatcatggaaaaccctaatctccagtcc 143
|||||| ||||| | ||||| ||||| ||||||||||||||||| || ||| ||||||
Sbjct: 243 gagatcccttctacgattcatatgcgtatgcaaatcatggaaaactcttatcgacagtcc 302
Query: 144 ccaattcgtgaaggaccaccttcgcatctcaatctccaatacaagcactacccaccaaca 203
|||||| ||||||||||||||||||| ||| || || |||||| || |||| |||||
Sbjct: 303 ccaatttgtgaaggaccaccttcgcaactccatgtcagatacaaacatgacccgtcaaca 362
Query: 204 attggtctatttcaccggtcatgaacccttcaaaatggaaacttgttctgtgcagtcatt 263
|||||||| ||| | ||||| | |||||| ||||| ||||| |||||||||||
Sbjct: 363 attggtctcttttgcaaaaaatgaatcgaacaaaatagaaacatgttcagtgcagtcatt 422
Query: 264 gattgaaaatccatcagcccctccagaaaccctaagttttatgatgaaccctaagtaccg 323
| | ||||| |||||||||||||| |||| || || || | | || | | ||| |||
Sbjct: 423 gttcgaaaacccatcagcccctccggaaatacttagcttcagggtggagtccaagcacca 482
Query: 324 attcattgtaggttcatgcaatgggttgctgtgtttgtgtgattatgatggttgtttcag 383
|| |||||||||||||| ||||| || |||||||||||||| || | |||| ||||||
Sbjct: 483 atatattgtaggttcatgttatgggctgatgtgtttgtgtgatcataacggttatttcag 542
Query: 384 attgattaacccctgtactagattgg 409
||| ||||| | |||||||||||
Sbjct: 543 gttgtggaacccttctactagattgg 568
Score = 61.9 bits (31), Expect = 5e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 477 ttatgggtttggttatgatcaagttaatgacaattataaggtg 519
|||||| |||||||||||||||||||||||||| || ||||||
Sbjct: 615 ttatggctttggttatgatcaagttaatgacaagtacaaggtg 657
>gnl|LJGI|DC594273 weakly similar to UniRef100_A7Q9Q9 Cluster: Chromosome chr5
scaffold_67, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_67, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (10%)
Length = 578
Score = 87.7 bits (44), Expect = 8e-17
Identities = 68/76 (89%)
Strand = Plus / Plus
Query: 99 attcaagtgcgtgtgcaaatcatggaaaaccctaatctccagtccccaattcgtgaagga 158
||||| |||||| ||||||||||||||||||||||| ||||||||||||||||| ||| |
Sbjct: 65 attcaggtgcgtctgcaaatcatggaaaaccctaatttccagtccccaattcgtcaagaa 124
Query: 159 ccaccttcgcatctca 174
| || ||||||||||
Sbjct: 125 ctactctcgcatctca 140
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 332 taggttcatgcaatgggttgctgtgtttgtgtgat 366
|||| ||||||||||||||||||||||| ||||||
Sbjct: 292 tagggtcatgcaatgggttgctgtgtttatgtgat 326
>gnl|LJGI|TC80995 weakly similar to UniRef100_A7PQD5 Cluster: Chromosome chr18
scaffold_24, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_24, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (12%)
Length = 1343
Score = 81.8 bits (41), Expect = 5e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 103 aagtgcgtgtgcaaatcatggaaaaccctaatctccagtccccaattcgtgaaggaccac 162
|||||||| |||||||||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 165 aagtgcgtctgcaaatcatggaaaattctaatctccagtccccaattcgccaaggaccac 224
Query: 163 cttcg 167
||||
Sbjct: 225 tttcg 229
>gnl|LJGI|TC60244 weakly similar to UniRef100_Q2HS67 Cluster: Cyclin-like F-box;
F-box protein interaction domain; n=1; Medicago
truncatula|Rep: Cyclin-like F-box; F-box protein
interaction domain - Medicago truncatula (Barrel medic),
partial (12%)
Length = 1433
Score = 77.8 bits (39), Expect = 8e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 97 caattcaagtgcgtgtgcaaatcatggaaaaccctaatctccagtccccaattcg 151
||||| |||||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 108 caattgaagtgcgtttgcaaatcatggaaaaccctaatctccgatccccaattcg 162
>gnl|LJGI|FS324043 weakly similar to UniRef100_Q2HWB4 Cluster: Cyclin-like F-box;
F-box protein interaction domain; n=1; Medicago
truncatula|Rep: Cyclin-like F-box; F-box protein
interaction domain - Medicago truncatula (Barrel medic),
partial (9%)
Length = 574
Score = 52.0 bits (26), Expect = 5e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 97 caattcaagtgcgtgtgcaaatcatggaaa 126
|||||||||||||| |||||||||||||||
Sbjct: 139 caattcaagtgcgtttgcaaatcatggaaa 168
>gnl|LJGI|BW626991 weakly similar to UniRef100_A7PQD5 Cluster: Chromosome chr18
scaffold_24, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_24, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (12%)
Length = 459
Score = 52.0 bits (26), Expect = 5e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 97 caattcaagtgcgtgtgcaaatcatggaaa 126
|||||||||||||| |||||||||||||||
Sbjct: 164 caattcaagtgcgtttgcaaatcatggaaa 193
>gnl|LJGI|TC73199 weakly similar to UniRef100_Q2HS67 Cluster: Cyclin-like F-box;
F-box protein interaction domain; n=1; Medicago
truncatula|Rep: Cyclin-like F-box; F-box protein
interaction domain - Medicago truncatula (Barrel medic),
partial (11%)
Length = 654
Score = 52.0 bits (26), Expect = 5e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 97 caattcaagtgcgtgtgcaaatcatggaaa 126
|||||||||||||| |||||||||||||||
Sbjct: 109 caattcaagtgcgtttgcaaatcatggaaa 138
>gnl|LJGI|TC65255 similar to UniRef100_Q2HWB4 Cluster: Cyclin-like F-box; F-box
protein interaction domain; n=1; Medicago
truncatula|Rep: Cyclin-like F-box; F-box protein
interaction domain - Medicago truncatula (Barrel medic),
partial (8%)
Length = 703
Score = 52.0 bits (26), Expect = 5e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 106 tgcgtgtgcaaatcatggaaaaccctaatctccagtccccaattcg 151
||||| ||||| ||||||||||||||||||||| |||| ||||||
Sbjct: 225 tgcgtatgcaagtcatggaaaaccctaatctccgatcccgaattcg 270
>gnl|LJGI|TC57901 similar to UniRef100_A2Q2H0 Cluster: F-box protein interaction
domain; n=1; Medicago truncatula|Rep: F-box protein
interaction domain - Medicago truncatula (Barrel medic),
partial (9%)
Length = 1406
Score = 52.0 bits (26), Expect = 5e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 97 caattcaagtgcgtgtgcaaatcatggaaa 126
|||||||||||||| |||||||||||||||
Sbjct: 106 caattcaagtgcgtttgcaaatcatggaaa 135