Miyakogusa Predicted Gene
- Lj5g3v1913930.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1913930.1 tr|G7JX91|G7JX91_MEDTR F-box/kelch-repeat protein
OS=Medicago truncatula GN=MTR_5g057710 PE=4
SV=1,32.43,0.0006,FBOX,F-box domain, cyclin-like; A Receptor for
Ubiquitination Targets,F-box domain, cyclin-like; F-b,CUFF.56179.1
(1102 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81178 2177 0.0
gnl|LJGI|TC80995 weakly similar to UniRef100_A7PQD5 Cluster: Chr... 86 5e-16
gnl|LJGI|TC74176 similar to UniRef100_A7Q9Q9 Cluster: Chromosome... 78 1e-13
gnl|LJGI|BP061497 weakly similar to UniRef100_Q2AB95 Cluster: Ta... 68 1e-10
gnl|LJGI|TC77088 UniRef100_Q4ZSV0 Cluster: Short-chain dehydroge... 60 3e-08
gnl|LJGI|TC65345 52 8e-06
>gnl|LJGI|TC81178
Length = 1336
Score = 2177 bits (1098), Expect = 0.0
Identities = 1101/1102 (99%)
Strand = Plus / Plus
Query: 1 atgcttgaaaccaccaatatgaagcagccacctccaccgttgttgttgtcgctggtctta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 atgcttgaaaccaccaatatgaagcagccacctccaccgttgttgttgtcgctggtctta 201
Query: 61 cccgaggaattgatcatcgaaattctccttaagcttccagtgagatcccttctacgattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 cccgaggaattgatcatcgaaattctccttaagcttccagtgagatcccttctacgattc 261
Query: 121 atatgcgtatgcaaatcatggaaaattcttatcgacagtccccaatttgtgaaggaccac 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 262 atatgcgtatgcaaatcatggaaaactcttatcgacagtccccaatttgtgaaggaccac 321
Query: 181 cttcgcaactccatgtcagatacaaacatgacccgtcaacaattggtctcttttgcaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 cttcgcaactccatgtcagatacaaacatgacccgtcaacaattggtctcttttgcaaaa 381
Query: 241 aatgaatcgaacaaaatagaaacatgttcagtgcagtcattgttcgaaaacccatcagcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 aatgaatcgaacaaaatagaaacatgttcagtgcagtcattgttcgaaaacccatcagcc 441
Query: 301 cctccggaaatacttagcttcagggtggagtccaagcaccaatatattgtaggttcatgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 cctccggaaatacttagcttcagggtggagtccaagcaccaatatattgtaggttcatgt 501
Query: 361 tatgggctgatgtgtttgtgtgatcataacggttatttcaggttgtggaacccttctact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 tatgggctgatgtgtttgtgtgatcataacggttatttcaggttgtggaacccttctact 561
Query: 421 agattggcttctgtgagatctccacgcatcaatattgtgaaattgttcactcgttatggc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 agattggcttctgtgagatctccacgcatcaatattgtgaaattgttcactcgttatggc 621
Query: 481 tttggttatgatcaagttaatgacaagtacaaggtgctatatactagaggctttgagact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 tttggttatgatcaagttaatgacaagtacaaggtgctatatactagaggctttgagact 681
Query: 541 agagttcatacctttggtaccaattgttggacaactattcacacttccccacgtgcacgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 agagttcatacctttggtaccaattgttggacaactattcacacttccccacgtgcacgg 741
Query: 601 ccagaatggtcagatgaggaggaaggaaaatttgtgagcggcactttgaattggttagct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 ccagaatggtcagatgaggaggaaggaaaatttgtgagcggcactttgaattggttagct 801
Query: 661 cctaaaagagattgtattatttcctttgatttggagaatgagacttatgatgaagtgtta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 cctaaaagagattgtattatttcctttgatttggagaatgagacttatgatgaagtgtta 861
Query: 721 ctccctcttcaactacatgacgactctccccgcaatcatgtgctagatgccttgagtaac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 862 ctccctcttcaactacatgacgactctccccgcaatcatgtgctagatgccttgagtaac 921
Query: 781 tgtctttgtttgagttactctaacaatattcattgtgctgtgtggttgatgaaaaaatat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 922 tgtctttgtttgagttactctaacaatattcattgtgctgtgtggttgatgaaaaaatat 981
Query: 841 ggcattcaagagtcttggaccaagttgatatcaatacctcgttggaagttacagattcct 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 982 ggcattcaagagtcttggaccaagttgatatcaatacctcgttggaagttacagattcct 1041
Query: 901 aagcgccctaggtgcgttaggctttcttttcaccttcgccccttgtgcatttcagaaaat 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1042 aagcgccctaggtgcgttaggctttcttttcaccttcgccccttgtgcatttcagaaaat 1101
Query: 961 gtggtggttctggtgagatctaatgatggtcatgtagttatgtttaacacaaataatggc 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1102 gtggtggttctggtgagatctaatgatggtcatgtagttatgtttaacacaaataatggc 1161
Query: 1021 aagttgaagtttcctaagatcaagggaagaattagtcacgatatgcatatttaccatgag 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1162 aagttgaagtttcctaagatcaagggaagaattagtcacgatatgcatatttaccatgag 1221
Query: 1081 tgtttagtttcaccattgtaga 1102
||||||||||||||||||||||
Sbjct: 1222 tgtttagtttcaccattgtaga 1243
>gnl|LJGI|TC80995 weakly similar to UniRef100_A7PQD5 Cluster: Chromosome chr18
scaffold_24, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_24, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (12%)
Length = 1343
Score = 85.7 bits (43), Expect = 5e-16
Identities = 82/95 (86%)
Strand = Plus / Plus
Query: 766 gatgccttgagtaactgtctttgtttgagttactctaacaatattcattgtgctgtgtgg 825
||||||||||||||||||||||| ||| |||||| ||| ||||||||| || |||||||
Sbjct: 864 gatgccttgagtaactgtctttgcttgtgttactttaatgatattcattatgttgtgtgg 923
Query: 826 ttgatgaaaaaatatggcattcaagagtcttggac 860
| |||||||| ||||||| |||| | ||||||||
Sbjct: 924 gtcatgaaaaagtatggcaatcaacaatcttggac 958
Score = 79.8 bits (40), Expect = 3e-14
Identities = 91/108 (84%)
Strand = Plus / Plus
Query: 624 aggaaaatttgtgagcggcactttgaattggttagctcctaaaagagattgtattatttc 683
||||||||||||||| || ||| | |||||||| | || ||||| || |||||||||
Sbjct: 695 aggaaaatttgtgagtggtactcttaattggttcgttctggaaagaaatgttattatttc 754
Query: 684 ctttgatttggagaatgagacttatgatgaagtgttactccctcttca 731
||||||| ||||||| ||||| |||| ||||||||| |||||||||||
Sbjct: 755 ctttgatctggagaaggagacctatggtgaagtgttgctccctcttca 802
Score = 61.9 bits (31), Expect = 8e-09
Identities = 76/91 (83%)
Strand = Plus / Plus
Query: 95 ttccagtgagatcccttctacgattcatatgcgtatgcaaatcatggaaaattcttatcg 154
|||| ||||||||| || || |||| | ||||| |||||||||||||||||||| |||
Sbjct: 139 ttccggtgagatccgttataagattgaagtgcgtctgcaaatcatggaaaattctaatct 198
Query: 155 acagtccccaatttgtgaaggaccaccttcg 185
|||||||||||| | ||||||||| ||||
Sbjct: 199 ccagtccccaattcgccaaggaccactttcg 229
Score = 56.0 bits (28), Expect = 5e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 475 tatggctttggttatgatcaagttaatgacaagtacaaggtgct 518
||||| ||||||||||||||| |||| ||||||||||| |||||
Sbjct: 537 tatggttttggttatgatcaacttaacgacaagtacaaagtgct 580
>gnl|LJGI|TC74176 similar to UniRef100_A7Q9Q9 Cluster: Chromosome chr5 scaffold_67,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_67, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 496
Score = 77.8 bits (39), Expect = 1e-13
Identities = 288/369 (78%), Gaps = 9/369 (2%)
Strand = Plus / Plus
Query: 54 ggtcttacccgaggaattgatcatcgaaattctccttaagcttccagtgagatcccttct 113
||||||||| |||||| | ||| ||| ||||||| || |||||| |||| |||||||||
Sbjct: 128 ggtcttaccagaggaactcatcgccgagattctccataggcttccggtgaaatcccttct 187
Query: 114 acgattcatatgcgtatgcaaatcatggaaaattcttatcgacagtccccaatttgtgaa 173
| ||||| ||||| |||||||| ||||||| || ||| || ||||||||| | |||
Sbjct: 188 gcaattcaggtgcgtctgcaaatcctggaaaaccctaatctccaatccccaattcgcgaa 247
Query: 174 ggaccaccttcgcaactccatgtcagatacaaacatgacccgtcaacaattggtctcttt 233
|||||||||||||| ||| || || |||||| | | |||| |||| ||||| ||||||
Sbjct: 248 ggaccaccttcgcatctcaatctccaatacaagcttaacccaccaacgattggcctcttt 307
Query: 234 tgcaaa----aa--atgaatcgaacaaaatagaaacatgttcagtgcagtcattgttcga 287
| || || ||| | ||| ||| ||||||||||| |||| |||||||||||
Sbjct: 308 caccaacgacaactatggttattacagaatggaaacatgttctgtgccttcattgttcga 367
Query: 288 aaacccatcagcccctccggaaatacttagcttcagggtgga---gtccaagcaccaata 344
|||||||||| ||||| || ||| || |||||| ||| || | ||| ||||||
Sbjct: 368 aaacccatcaacccctgcgaaaaccctaagcttccaggtagaaccctacaataaccaatt 427
Query: 345 tattgtaggttcatgttatgggctgatgtgtttgtgtgatcataacggttatttcaggtt 404
|||||||||||| ||| |||||||| | ||||| |||||||| || |||||||| || ||
Sbjct: 428 tattgtaggttcttgtgatgggctggtatgtttttgtgatcaaaatggttatttaagatt 487
Query: 405 gtggaaccc 413
|||||||||
Sbjct: 488 gtggaaccc 496
>gnl|LJGI|BP061497 weakly similar to UniRef100_Q2AB95 Cluster: Taste receptor type 2;
n=1; Monodelphis domestica|Rep: Taste receptor type 2 -
Monodelphis domestica (Short-tailed gray opossum),
partial (6%)
Length = 348
Score = 67.9 bits (34), Expect = 1e-10
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 1061 atatgcatatttaccatgagtgtttagtttcaccattgtaga 1102
|||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 216 atatgcatatttaccatgagagttcagtttcaccattgtaga 175
>gnl|LJGI|TC77088 UniRef100_Q4ZSV0 Cluster: Short-chain dehydrogenase/reductase SDR;
n=1; Pseudomonas syringae pv. syringae B728a|Rep:
Short-chain dehydrogenase/reductase SDR - Pseudomonas
syringae pv. syringae (strain B728a), partial (5%)
Length = 829
Score = 60.0 bits (30), Expect = 3e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 1061 atatgcatatttaccatgagtgtttagtttcaccattgtaga 1102
||||| |||||||||||||| ||| |||||||||||||||||
Sbjct: 610 atatgtatatttaccatgagagttcagtttcaccattgtaga 651
Score = 58.0 bits (29), Expect = 1e-07
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 665 aaagagattgtattatttcctttgatttggagaatgagacttatgatgaagtgttactcc 724
|||||||||| |||||||||||| || |||||| |||||||||| | |||| || ||||
Sbjct: 205 aaagagattgaattatttcctttaatctggagacggagacttatggtcaagtattgctcc 264
Query: 725 ctctt 729
|||||
Sbjct: 265 ctctt 269
Score = 58.0 bits (29), Expect = 1e-07
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 929 ttcaccttcgccccttgtgcatttcagaaaatg 961
||||| |||||||||||||||||||||||||||
Sbjct: 454 ttcacattcgccccttgtgcatttcagaaaatg 486
Score = 56.0 bits (28), Expect = 5e-07
Identities = 85/104 (81%)
Strand = Plus / Plus
Query: 781 tgtctttgtttgagttactctaacaatattcattgtgctgtgtggttgatgaaaaaatat 840
|||||||||||| |||||| || |||| ||||||| | |||||| ||||| | |||
Sbjct: 321 tgtctttgtttgtgttacttaaatgatatgcattgtgttctgtggtccatgaatatgtat 380
Query: 841 ggcattcaagagtcttggaccaagttgatatcaatacctcgttg 884
|||||||||||||||||| | || ||||| || || ||||||||
Sbjct: 381 ggcattcaagagtcttggtctaaattgatttcgatccctcgttg 424
>gnl|LJGI|TC65345
Length = 776
Score = 52.0 bits (26), Expect = 8e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 482 ttggttatgatcaagttaatgacaagtacaaggtgcta 519
|||| |||||| |||| |||||||||||||||||||||
Sbjct: 391 ttggctatgataaagtcaatgacaagtacaaggtgcta 428