Miyakogusa Predicted Gene
- Lj5g3v1903700.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1903700.2 CUFF.56144.2
(933 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74962 similar to UniRef100_A7QRK4 Cluster: Chromosome... 827 0.0
gnl|LJGI|TC68404 similar to UniRef100_UPI0000163291 Cluster: S1 ... 176 2e-43
>gnl|LJGI|TC74962 similar to UniRef100_A7QRK4 Cluster: Chromosome undetermined
scaffold_151, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_151,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (27%)
Length = 810
Score = 827 bits (417), Expect = 0.0
Identities = 426/429 (99%)
Strand = Plus / Plus
Query: 505 aagctatttcttcgcgaaggaacacttctagatgggactgtgaaaaagatctttccgtat 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagctatttcttcgcgaaggaacacttctagatgggactgtgaaaaagatctttccgtat 60
Query: 565 ggagcccaaattaagataggagtttctaacagaagtgggttgctgcatatttcaaatatc 624
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 61 tgagcccaaattaagataggagtttctaacagaagtgggttgctacatatttcaaatatc 120
Query: 625 agtcgagctgaaattacttctgtcagcgacgtactttcagttgatgagaacgttaaagtt 684
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 121 agtcgagctgaaattacttctgtcagcgacatactttcagttgatgagaacgttaaagtt 180
Query: 685 ctggtggtgaagtcagcatttcctgataaaatttctctgagcattgcagcccttgaaagt 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctggtggtgaagtcagcatttcctgataaaatttctctgagcattgcagcccttgaaagt 240
Query: 745 gaacctggcctttttctatcaaataaagagagagtatttctggaagctgagatgatggca 804
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaacctggcctttttctatcaaataaagagagagtatttctggaagctgagatgatggca 300
Query: 805 aagaaatacaagcaaaagctacctcctgctattaccacgaaacgattagacccgctacca 864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aagaaatacaagcaaaagctacctcctgctattaccacgaaacgattagacccgctacca 360
Query: 865 actagtgcactgccttttgaaaatgaagcactttatgcaaactggaagtggtttaaattt 924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 actagtgcactgccttttgaaaatgaagcactttatgcaaactggaagtggtttaaattt 420
Query: 925 gaaaaataa 933
|||||||||
Sbjct: 421 gaaaaataa 429
>gnl|LJGI|TC68404 similar to UniRef100_UPI0000163291 Cluster: S1 RNA-binding
domain-containing protein; n=1; Arabidopsis
thaliana|Rep: S1 RNA-binding domain-containing protein -
Arabidopsis thaliana, partial (12%)
Length = 671
Score = 176 bits (89), Expect = 2e-43
Identities = 215/257 (83%)
Strand = Plus / Plus
Query: 676 gttaaagttctggtggtgaagtcagcatttcctgataaaatttctctgagcattgcagcc 735
|||||||||||||||||||| || |||||||||| |||||||||| | ||||| | |
Sbjct: 13 gttaaagttctggtggtgaaatcggcatttcctggtaaaatttctttaagcatcagggac 72
Query: 736 cttgaaagtgaacctggcctttttctatcaaataaagagagagtatttctggaagctgag 795
|||||||||||||||||||| ||||||||||||| |||||||||||||||||| || ||
Sbjct: 73 cttgaaagtgaacctggcctatttctatcaaatagagagagagtatttctggaggcagat 132
Query: 796 atgatggcaaagaaatacaagcaaaagctacctcctgctattaccacgaaacgattagac 855
|||||||| || ||||||||| |||| |||||||||||| |||||| ||| || | |
Sbjct: 133 atgatggccaaaaaatacaaggaaaaactacctcctgctcttaccagtcaacaatcaaaa 192
Query: 856 ccgctaccaactagtgcactgccttttgaaaatgaagcactttatgcaaactggaagtgg 915
| | ||| ||||| |||||||| ||||| |||||||||||||| || |||||||||
Sbjct: 193 tcagtttcaaacagtgccctgcctttcgaaaacgaagcactttatgctaattggaagtgg 252
Query: 916 tttaaatttgaaaaata 932
|| || ||||| |||||
Sbjct: 253 ttcaagtttgagaaata 269