Miyakogusa Predicted Gene

Lj5g3v1903700.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1903700.1 CUFF.56144.1
         (1059 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|CN825107 similar to UniRef100_A7QRK4 Cluster: Chromosom...   313   1e-84
gnl|LJGI|TC61710 similar to UniRef100_A7QRK4 Cluster: Chromosome...   103   2e-21

>gnl|LJGI|CN825107 similar to UniRef100_A7QRK4 Cluster: Chromosome undetermined
           scaffold_151, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_151,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (8%)
          Length = 254

 Score =  313 bits (158), Expect = 1e-84
 Identities = 158/158 (100%)
 Strand = Plus / Plus

                                                                       
Query: 330 gttggcttccgaagctgaaatggaccaagagaagccttctcagcaggaagctttggcacc 389
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2   gttggcttccgaagctgaaatggaccaagagaagccttctcagcaggaagctttggcacc 61

                                                                       
Query: 390 ctttttgaagtttttcaaaggtagtgattctatggaggaggttgaagaagatggtgatgt 449
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62  ctttttgaagtttttcaaaggtagtgattctatggaggaggttgaagaagatggtgatgt 121

                                                 
Query: 450 attgcaagtttctgaagaaaaatatgtagtggatggtg 487
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 122 attgcaagtttctgaagaaaaatatgtagtggatggtg 159



 Score =  107 bits (54), Expect = 1e-22
 Identities = 54/54 (100%)
 Strand = Plus / Plus

                                                                 
Query: 529 gttggtgttgagtactatgagcccaaacctggggattttgtggtgggtgtggtt 582
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gttggtgttgagtactatgagcccaaacctggggattttgtggtgggtgtggtt 254


>gnl|LJGI|TC61710 similar to UniRef100_A7QRK4 Cluster: Chromosome undetermined
           scaffold_151, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_151,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (11%)
          Length = 723

 Score =  103 bits (52), Expect = 2e-21
 Identities = 136/164 (82%)
 Strand = Plus / Plus

                                                                       
Query: 537 tgagtactatgagcccaaacctggggattttgtggtgggtgtggttgtttcaggtaatga 596
           |||||||||||||||||| ||||||||||||||| | ||||| |||||||||||||||| 
Sbjct: 437 tgagtactatgagcccaagcctggggattttgtgtttggtgttgttgtttcaggtaatgc 496

                                                                       
Query: 597 atataagcttgatatcaatgtgggtgcagacttactaggtacaatgttaacaaaggaagt 656
           | | | |||  || |||||||||| || || |||| ||| ||| |||| || ||||| ||
Sbjct: 497 aaacaggctcaatgtcaatgtgggagctgagttaccagggacattgttgactaaggaggt 556

                                                       
Query: 657 gcttcccttgtatggcaaagaaatggagaacttgttatttgatg 700
           |||||||||| |  | || ||||||||| ||||| ||| |||||
Sbjct: 557 gcttcccttgaacagtaatgaaatggagtacttgatatgtgatg 600