Miyakogusa Predicted Gene

Lj5g3v1902660.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1902660.1 tr|C6ZRZ9|C6ZRZ9_SOYBN Leucine-rich repeat
transmembrane protein kinase OS=Glycine max PE=2
SV=1,88.56,0,seg,NULL; PROTEIN_KINASE_DOM,Protein kinase, catalytic
domain; Pkinase,Protein kinase, catalytic dom,CUFF.56132.1
         (2940 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP052471 similar to UniRef100_A7QRK5 Cluster: Chromosom...   222   1e-56
gnl|LJGI|TC58946 similar to UniRef100_A7QKS1 Cluster: Chromosome...    74   6e-12

>gnl|LJGI|BP052471 similar to UniRef100_A7QRK5 Cluster: Chromosome undetermined
            scaffold_151, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_151, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (4%)
          Length = 432

 Score =  222 bits (112), Expect = 1e-56
 Identities = 130/136 (95%)
 Strand = Plus / Minus

                                                                        
Query: 2805 ttgtgtgaactcttctccgacagaacgccccaccatgaaggaagtggttgctctactcat 2864
            ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 432  ttgtgtgaactcttctccgacagaacgcccccccatgaaggaagtggttgctctactcat 373

                                                                        
Query: 2865 ggaggtgaagagccagccagaggaaatgggaaagacctcacaacctctaataaagcagtc 2924
            |||||||||||||| ||| |||||||||||||||||||| | ||||||||||||||||||
Sbjct: 372  ggaggtgaagagcccgcccgaggaaatgggaaagacctccccacctctaataaagcagtc 313

                            
Query: 2925 ctcaactcaaagctga 2940
            |||||||| |||||||
Sbjct: 312  ctcaactccaagctga 297


>gnl|LJGI|TC58946 similar to UniRef100_A7QKS1 Cluster: Chromosome undetermined
            scaffold_114, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_114, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (13%)
          Length = 845

 Score = 73.8 bits (37), Expect = 6e-12
 Identities = 76/89 (85%)
 Strand = Plus / Plus

                                                                        
Query: 2527 gttgctggttcctatggctatattgcaccagagtatggctactccatgaacataacagag 2586
            ||||||||||||||||| |||||||| ||||| |||||||||    |||| || ||||||
Sbjct: 3    gttgctggttcctatggatatattgctccagaatatggctacatgttgaagatcacagag 62

                                         
Query: 2587 aagagtgatgtctacagttatggagtggt 2615
            |||||||| || ||||| ||||| |||||
Sbjct: 63   aagagtgacgtttacagctatggtgtggt 91