Miyakogusa Predicted Gene

Lj5g3v1889470.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1889470.1 tr|G7L070|G7L070_MEDTR F-box protein OS=Medicago
truncatula GN=MTR_7g055830 PE=4 SV=1,38.1,0.0000003, ,CUFF.56112.1
         (307 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC79482 weakly similar to UniRef100_A7Q9Q9 Cluster: Chr...    58   3e-08
gnl|LJGI|TC73392                                                       58   3e-08
gnl|LJGI|TC79437                                                       54   5e-07
gnl|LJGI|TC67010 weakly similar to UniRef100_A4UV34 Cluster: F-b...    50   8e-06

>gnl|LJGI|TC79482 weakly similar to UniRef100_A7Q9Q9 Cluster: Chromosome chr5
           scaffold_67, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr5 scaffold_67, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (10%)
          Length = 551

 Score = 58.0 bits (29), Expect = 3e-08
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                            
Query: 109 gtttatgtgagtaacacccttaattggttagca 141
           ||||||||||||||||| |||||||||||||||
Sbjct: 477 gtttatgtgagtaacactcttaattggttagca 509


>gnl|LJGI|TC73392 
          Length = 647

 Score = 58.0 bits (29), Expect = 3e-08
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                            
Query: 109 gtttatgtgagtaacacccttaattggttagca 141
           ||||||||||||||||| |||||||||||||||
Sbjct: 513 gtttatgtgagtaacactcttaattggttagca 545



 Score = 54.0 bits (27), Expect = 5e-07
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 193 attgtttcgtttgatttggggaaagaagagt 223
           ||||||||||||||||||| |||||||||||
Sbjct: 564 attgtttcgtttgatttggagaaagaagagt 594


>gnl|LJGI|TC79437 
          Length = 744

 Score = 54.0 bits (27), Expect = 5e-07
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 193 attgtttcgtttgatttggggaaagaagagt 223
           ||||||||||||||||||| |||||||||||
Sbjct: 1   attgtttcgtttgatttggagaaagaagagt 31


>gnl|LJGI|TC67010 weakly similar to UniRef100_A4UV34 Cluster: F-box domain-containing
           protein; n=2; Solanum|Rep: F-box domain-containing
           protein - Solanum tuberosum (Potato), partial (15%)
          Length = 1074

 Score = 50.1 bits (25), Expect = 8e-06
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                       
Query: 15  gacaatggtaaatgtttataacatgggtgataggcgctggagaagaatccaagtttcccc 74
           ||||||||| |||||||| |||||||||||||   | ||||||| ||| ||| |||||||
Sbjct: 557 gacaatggtgaatgtttacaacatgggtgataattgttggagaacaattcaaatttcccc 616

            
Query: 75  t 75
           |
Sbjct: 617 t 617