Miyakogusa Predicted Gene
- Lj5g3v1889420.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1889420.2 CUFF.56191.2
(579 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58162 similar to UniRef100_Q9FR34 Cluster: Ripening r... 1011 0.0
gnl|LJGI|TC62301 similar to UniRef100_Q9FR62 Cluster: P23; n=1; ... 930 0.0
>gnl|LJGI|TC58162 similar to UniRef100_Q9FR34 Cluster: Ripening regulated protein
DDTFR8; n=1; Solanum lycopersicum|Rep: Ripening
regulated protein DDTFR8 - Solanum lycopersicum (Tomato)
(Lycopersicon esculentum), partial (72%)
Length = 789
Score = 1011 bits (510), Expect = 0.0
Identities = 556/579 (96%)
Strand = Plus / Plus
Query: 1 atgagtcgccatcctcctgtcaaatgggctcagagatctgatgagctctacataactatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 atgagtcgccatcctcctgtcaaatgggctcagagatctgatgagctctacataactatt 125
Query: 61 gagttacctgatgctcaggatgtgaagcttatactggagccagaaggaaaactttatttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 gagttacctgatgctcaggatgtgaagcttatactggagccagaaggaaaactttatttc 185
Query: 121 tctgcaactgctggtccagaaaatattccttatgagtttaactttgacctgtttgacaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 tctgcaactgctggtccagaaaatattccttatgagtttaactttgacctgtttgacaag 245
Query: 181 gttgatgtaaataatagcgaatccagtgttagtaaaagaaatatcatctacttgataagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 gttgatgtaaataatagcgaatccagtgttagtaaaagaaatatcatctacttgataagc 305
Query: 241 aaggctgagagtaaatgttgggacagattgttaaagcagggagggaaaccaccggtgttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 aaggctgagagtaaatgttgggacagattgttaaagcagggagggaaaccaccggtgttt 365
Query: 301 ttgaaggtagattgggacaagtgggttgatgaagatgaggaacaagaggatgataaacct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 ttgaaggtagattgggacaagtgggttgatgaagatgaggaacaagaggatgataaacct 425
Query: 361 gggcctggcgcagacatggactttggtgactttgatttttctaacttgaacatggatgga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 gggcctggcgcagacatggactttggtgactttgatttttctaacttgaacatggatgga 485
Query: 421 ggcgagggactggaagacgtggcannnnnnnnnnnnnnnnnnnnnnngagtgacatagaa 480
|||||||||||||||||||||||| |||||||||||||
Sbjct: 486 ggcgagggactggaagacgtggcagatgatgatgatgatgatgatgagagtgacatagaa 545
Query: 481 gatgaggtcacaggacaagcatcagctgataatgaacctgactcaaaaggcgccgtgagc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 gatgaggtcacaggacaagcatcagctgataatgaacctgactcaaaaggcgccgtgagc 605
Query: 541 agcaatcctagtgttgaacctgatgctaaaaagtaactt 579
|||||||||||||||||||||||||||||||||||||||
Sbjct: 606 agcaatcctagtgttgaacctgatgctaaaaagtaactt 644
>gnl|LJGI|TC62301 similar to UniRef100_Q9FR62 Cluster: P23; n=1; Brassica napus|Rep:
P23 - Brassica napus (Rape), partial (59%)
Length = 929
Score = 930 bits (469), Expect = 0.0
Identities = 544/579 (93%), Gaps = 12/579 (2%)
Strand = Plus / Plus
Query: 1 atgagtcgccatcctcctgtcaaatgggctcagagatctgatgagctctacataactatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 atgagtcgccatcctcctgtcaaatgggctcagagatctgatgagctctacataactatt 123
Query: 61 gagttacctgatgctcaggatgtgaagcttatactggagccagaaggaaaactttatttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 gagttacctgatgctcaggatgtgaagcttatactggagccagaaggaaaactttatttc 183
Query: 121 tctgcaactgctggtccagaaaatattccttatgagtttaactttgacctgtttgacaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 tctgcaactgctggtccagaaaatattccttatgagtttaactttgacctgtttgacaag 243
Query: 181 gttgatgtaaataatagcgaatccagtgttagtaaaagaaatatcatctacttgataagc 240
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 ------------aatagcgaatccagtgttagtaaaagaaatatcatctacttgataagc 291
Query: 241 aaggctgagagtaaatgttgggacagattgttaaagcagggagggaaaccaccggtgttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 aaggctgagagtaaatgttgggacagattgttaaagcagggagggaaaccaccggtgttt 351
Query: 301 ttgaaggtagattgggacaagtgggttgatgaagatgaggaacaagaggatgataaacct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 ttgaaggtagattgggacaagtgggttgatgaagatgaggaacaagaggatgataaacct 411
Query: 361 gggcctggcgcagacatggactttggtgactttgatttttctaacttgaacatggatgga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 gggcctggcgcagacatggactttggtgactttgatttttctaacttgaacatggatgga 471
Query: 421 ggcgagggactggaagacgtggcannnnnnnnnnnnnnnnnnnnnnngagtgacatagaa 480
|||||||||||||||||||||||| |||||||||||||
Sbjct: 472 ggcgagggactggaagacgtggcagatgatgatgatgatgatgatgagagtgacatagaa 531
Query: 481 gatgaggtcacaggacaagcatcagctgataatgaacctgactcaaaaggcgccgtgagc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 gatgaggtcacaggacaagcatcagctgataatgaacctgactcaaaaggcgccgtgagc 591
Query: 541 agcaatcctagtgttgaacctgatgctaaaaagtaactt 579
|||||||||||||||||||||||||||||||||||||||
Sbjct: 592 agcaatcctagtgttgaacctgatgctaaaaagtaactt 630