Miyakogusa Predicted Gene
- Lj5g3v1872900.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1872900.1 Non Chatacterized Hit- tr|I1NH92|I1NH92_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.39746
PE,84.45,0,DUF668,Protein of unknown function DUF668; DUF3475,Protein
of unknown function DUF3475; seg,NULL; co,CUFF.56247.1
(1965 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|CN825414 similar to UniRef100_A7PKM8 Cluster: Chromosom... 1154 0.0
gnl|LJGI|TC79651 similar to UniRef100_A7NSU5 Cluster: Chromosome... 72 1e-11
gnl|LJGI|FS335736 similar to UniRef100_A7PKM8 Cluster: Chromosom... 64 4e-09
>gnl|LJGI|CN825414 similar to UniRef100_A7PKM8 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 583
Score = 1154 bits (582), Expect = 0.0
Identities = 582/582 (100%)
Strand = Plus / Plus
Query: 658 gaagaattgaaaatattttctggtgaagttgtacgatttggaaatcgttgtaaagatcct 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gaagaattgaaaatattttctggtgaagttgtacgatttggaaatcgttgtaaagatcct 61
Query: 718 cagtggcacaacctggatcgctattttgagaaattaggctcagagctgacaccacaaaag 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 cagtggcacaacctggatcgctattttgagaaattaggctcagagctgacaccacaaaag 121
Query: 778 caattgaaagaggaagcagaggttgtgatgcaacaactaatgacctatgttcaatataca 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 caattgaaagaggaagcagaggttgtgatgcaacaactaatgacctatgttcaatataca 181
Query: 838 gcggaattatatcatgaattgcatgccttagacaggtttgatcaagattatcggcgcaag 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gcggaattatatcatgaattgcatgccttagacaggtttgatcaagattatcggcgcaag 241
Query: 898 cttcaagaagaggacaattcaaatgccacacaaagaggagacagccttgcaattttaaga 957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 cttcaagaagaggacaattcaaatgccacacaaagaggagacagccttgcaattttaaga 301
Query: 958 tcagaactgaagagtcaaaagaagcatgtaagaaatttgaagaaaaaatcactgtggtcc 1017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tcagaactgaagagtcaaaagaagcatgtaagaaatttgaagaaaaaatcactgtggtcc 361
Query: 1018 aaaattttggaagaggtgatggaaaagttcgtagacgttgtcaattttctgtatttggag 1077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 aaaattttggaagaggtgatggaaaagttcgtagacgttgtcaattttctgtatttggag 421
Query: 1078 atacatgaagcatttggtagtgctgaccctgataagcaagtgaaagattctcaaggaaac 1137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 atacatgaagcatttggtagtgctgaccctgataagcaagtgaaagattctcaaggaaac 481
Query: 1138 cataagaagttgggatctgctggtcttgctttgcattatgcaaacattatcactcaaatt 1197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 cataagaagttgggatctgctggtcttgctttgcattatgcaaacattatcactcaaatt 541
Query: 1198 gatactctggtgtctcgatcaagttctgtgcctcctaatacg 1239
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gatactctggtgtctcgatcaagttctgtgcctcctaatacg 583
>gnl|LJGI|TC79651 similar to UniRef100_A7NSU5 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 1114
Score = 71.9 bits (36), Expect = 1e-11
Identities = 87/104 (83%)
Strand = Plus / Plus
Query: 1340 tcaaagctgaaatggagaaaacattgcagtggcttgttcctattgccaccaacacaacga 1399
|||||||||||||||| || | | ||||||||| ||| ||||||| || || || |
Sbjct: 340 tcaaagctgaaatggataagattctccagtggcttactccatttgccacaaatacgacca 399
Query: 1400 aagctcatcatggctttggatgggttggagaatgggcaaataca 1443
|||| ||||| || ||||||||||||||||||||||||||||||
Sbjct: 400 aagcacatcaaggttttggatgggttggagaatgggcaaataca 443
>gnl|LJGI|FS335736 similar to UniRef100_A7PKM8 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 789
Score = 63.9 bits (32), Expect = 4e-09
Identities = 86/104 (82%)
Strand = Plus / Plus
Query: 1342 aaagctgaaatggagaaaacattgcagtggcttgttcctattgccaccaacacaacgaaa 1401
|||| ||| ||||||||||||||||| ||||| ||||| || || || |||||| | ||
Sbjct: 447 aaagatgagatggagaaaacattgcattggctggttccaatggctacaaacacagccaag 506
Query: 1402 gctcatcatggctttggatgggttggagaatgggcaaatacagg 1445
|| |||||||| ||||| ||||| || || |||||||| |||||
Sbjct: 507 gcgcatcatggttttggttgggtaggggagtgggcaaacacagg 550
Score = 58.0 bits (29), Expect = 2e-07
Identities = 68/81 (83%)
Strand = Plus / Plus
Query: 960 agaactgaagagtcaaaagaagcatgtaagaaatttgaagaaaaaatcactgtggtccaa 1019
|||||| || |||||||||||||| || | ||||||||||||| ||||| |||||||
Sbjct: 65 agaacttaaaagtcaaaagaagcaagttaagcatttgaagaaaaagtcactttggtccag 124
Query: 1020 aattttggaagaggtgatgga 1040
|| |||||| ||||| |||||
Sbjct: 125 aagtttggaggaggttatgga 145