Miyakogusa Predicted Gene

Lj5g3v1869800.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1869800.1 tr|A9S8A5|A9S8A5_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_125705,39.84,6e-18,seg,NULL;
Thioredoxin-like,Thioredoxin-like fold;
Thioredoxin_6,NULL,CUFF.56092.1
         (720 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC75266 weakly similar to UniRef100_Q9LQG5 Cluster: F15...  1074   0.0  
gnl|LJGI|TC60540 similar to UniRef100_A7QXE3 Cluster: Chromosome...   131   7e-30
gnl|LJGI|TC62328 similar to UniRef100_A7PFR5 Cluster: Chromosome...   127   1e-28

>gnl|LJGI|TC75266 weakly similar to UniRef100_Q9LQG5 Cluster: F15O4.20; n=1;
           Arabidopsis thaliana|Rep: F15O4.20 - Arabidopsis
           thaliana (Mouse-ear cress), partial (21%)
          Length = 804

 Score = 1074 bits (542), Expect = 0.0
 Identities = 542/542 (100%)
 Strand = Plus / Plus

                                                                       
Query: 179 atggtaggaaaatagttttgacaattgtggaggatgaaaatgaagaaaattcaaaggaac 238
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atggtaggaaaatagttttgacaattgtggaggatgaaaatgaagaaaattcaaaggaac 60

                                                                       
Query: 239 tgattaagttattgaagggtgctgcatctgcaaatcgtgacttaatatttggttatgttg 298
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tgattaagttattgaagggtgctgcatctgcaaatcgtgacttaatatttggttatgttg 120

                                                                       
Query: 299 gagttaaacagatggacgaattcgctgacaaatttgataccagtactaaactaccaaaga 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gagttaaacagatggacgaattcgctgacaaatttgataccagtactaaactaccaaaga 180

                                                                       
Query: 359 tggtcatttgggataaaagtgatgactacctttctgttgttggttcagaaagcattgaag 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tggtcatttgggataaaagtgatgactacctttctgttgttggttcagaaagcattgaag 240

                                                                       
Query: 419 gagaggatcagggaactcaaatcactaaatttctagaaggatatagagaaggaagaactg 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gagaggatcagggaactcaaatcactaaatttctagaaggatatagagaaggaagaactg 300

                                                                       
Query: 479 tacagaaaagacttagtgggccttcactgatgcaatttatccatcgatcttttgacatta 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tacagaaaagacttagtgggccttcactgatgcaatttatccatcgatcttttgacatta 360

                                                                       
Query: 539 gaatggtgtacatgattgtatttatggttgcagtattcatacttattcagacccttggcg 598
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaatggtgtacatgattgtatttatggttgcagtattcatacttattcagacccttggcg 420

                                                                       
Query: 599 gtaaaggaggtgatgaacaccatagagtaccaaatcaagaacaggtagatcatgcaagca 658
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtaaaggaggtgatgaacaccatagagtaccaaatcaagaacaggtagatcatgcaagca 480

                                                                       
Query: 659 gctctgtttcagaagttgaaagcaaagaagagtataaaccaggagacaaaaaggaagatt 718
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gctctgtttcagaagttgaaagcaaagaagagtataaaccaggagacaaaaaggaagatt 540

             
Query: 719 aa 720
           ||
Sbjct: 541 aa 542


>gnl|LJGI|TC60540 similar to UniRef100_A7QXE3 Cluster: Chromosome undetermined
           scaffold_221, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_221,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (43%)
          Length = 774

 Score =  131 bits (66), Expect = 7e-30
 Identities = 66/66 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggtattgtatgactttgataagattcctgcattggtttctcttaatccacagttcaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 atggtattgtatgactttgataagattcctgcattggtttctcttaatccacagttcaat 768

                 
Query: 61  gagcgg 66
           ||||||
Sbjct: 769 gagcgg 774


>gnl|LJGI|TC62328 similar to UniRef100_A7PFR5 Cluster: Chromosome chr11 scaffold_14,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr11 scaffold_14, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (40%)
          Length = 1240

 Score =  127 bits (64), Expect = 1e-28
 Identities = 64/64 (100%)
 Strand = Plus / Plus

                                                                        
Query: 657  cagctctgtttcagaagttgaaagcaaagaagagtataaaccaggagacaaaaaggaaga 716
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 992  cagctctgtttcagaagttgaaagcaaagaagagtataaaccaggagacaaaaaggaaga 1051

                
Query: 717  ttaa 720
            ||||
Sbjct: 1052 ttaa 1055