Miyakogusa Predicted Gene

Lj5g3v1868770.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1868770.1 Non Chatacterized Hit- tr|B9R6W1|B9R6W1_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,30.43,0.03,seg,NULL; DUF688,Protein of unknown function
DUF688,CUFF.56085.1
         (631 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC67313                                                     1251   0.0  

>gnl|LJGI|TC67313 
          Length = 1583

 Score = 1251 bits (631), Expect = 0.0
 Identities = 631/631 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggactcttcagaaactctcagtcaacatgccaaggttgtcacaaaacaatgtgacatc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60  atggactcttcagaaactctcagtcaacatgccaaggttgtcacaaaacaatgtgacatc 119

                                                                       
Query: 61  ttccctgccggaaagtacctatcttctcgccggactcagtcgttctcctcctcttgttca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 ttccctgccggaaagtacctatcttctcgccggactcagtcgttctcctcctcttgttca 179

                                                                       
Query: 121 tcactttcaccttccacctcctcctttgaatcaatatatttcaatgaggatcctctgctc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 tcactttcaccttccacctcctcctttgaatcaatatatttcaatgaggatcctctgctc 239

                                                                       
Query: 181 agtcctgcatccccactaataaggctctctggtgttccattttcttgggaacatttacca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 agtcctgcatccccactaataaggctctctggtgttccattttcttgggaacatttacca 299

                                                                       
Query: 241 ggaattcccaagaaacaaaactccaagaaaaagcaggactcatccatgaaactgttgcca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ggaattcccaagaaacaaaactccaagaaaaagcaggactcatccatgaaactgttgcca 359

                                                                       
Query: 301 ttgccccctccaaccaccacctcacagcactcttctaagaggaccactcatgaagaaact 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ttgccccctccaaccaccacctcacagcactcttctaagaggaccactcatgaagaaact 419

                                                                       
Query: 361 tggaagaagaattcaacaaaaagtgtctttcaaagggatcctttctttgctgcaatggtt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 tggaagaagaattcaacaaaaagtgtctttcaaagggatcctttctttgctgcaatggtt 479

                                                                       
Query: 421 gaatgctcaaaggatgatgatgaccaagaagaaattacaagcggtaatttgtggaatgga 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 gaatgctcaaaggatgatgatgaccaagaagaaattacaagcggtaatttgtggaatgga 539

                                                                       
Query: 481 gctaaggtttcaaggagtgttagtgatcgttttggattttttagcctttatggttcttgc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 gctaaggtttcaaggagtgttagtgatcgttttggattttttagcctttatggttcttgc 599

                                                                       
Query: 541 aagagaacttgtgctgtttctgaatctctagtttttcttccaagctcaagaagaagcacc 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 aagagaacttgtgctgtttctgaatctctagtttttcttccaagctcaagaagaagcacc 659

                                          
Query: 601 tatcaacatgttactcgcaggcccctctgag 631
           |||||||||||||||||||||||||||||||
Sbjct: 660 tatcaacatgttactcgcaggcccctctgag 690