Miyakogusa Predicted Gene
- Lj5g3v1865690.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1865690.1 tr|I0YPV2|I0YPV2_9CHLO Protein CrcB homolog
OS=Coccomyxa subellipsoidea C-169 GN=crcB PE=3
SV=1,27.68,8e-18,CRCB,Camphor resistance CrcB protein; CrbC,Camphor
resistance CrcB protein,gene.g62474.t1.1
(1275 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67684 similar to UniRef100_A7NV85 Cluster: Chromosome... 1094 0.0
gnl|LJGI|TC81972 similar to UniRef100_A7NV85 Cluster: Chromosome... 1047 0.0
>gnl|LJGI|TC67684 similar to UniRef100_A7NV85 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (31%)
Length = 799
Score = 1094 bits (552), Expect = 0.0
Identities = 562/564 (99%), Gaps = 1/564 (0%)
Strand = Plus / Plus
Query: 86 agagcaacagttttcgtttgtcttttgacaacagatcagaaaatggagctgtttctactc 145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 agagcaacagttttcgtttgtcttttgacaacagatcagaaaatggagctgtttctactc 295
Query: 146 tcattcaagatgggaacagattgcagcccaattcctctgttatgcctttgcaaattgagc 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 tcattcaagatgggaacagattgcagcccaattcctctgttatgcctttgcaaattgagc 355
Query: 206 tcacatcaccactttctaccgatgcagttttgatttctgaagaaggtgcaaaggatgagc 265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 tcacatcaccactttctaccgatgcagttttgatttctgaagaaggtgcaaaggatgagc 415
Query: 266 ataatggtttgccagagtggctggactatatttcatgtatggctcttttagctgttttcg 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 ataatggtttgccagagtggctggactatatttcatgtatggctcttttagctgttttcg 475
Query: 326 gaattcttggggttctaacaagatatttactgcaaaagttatttggccctggggttgcca 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 gaattcttggggttctaacaagatatttactgcaaaagttatttggccctggggttgcca 535
Query: 386 atgtgacaagcgaccaaactattctttaccctgaccttccttctaatgtggttggttcat 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 atgtgacaagcgaccaaactattctttaccctgaccttccttctaatgtggttggttcat 595
Query: 446 ttcttatgggatggtttggtgttgtattcaaaggagacatatctcatgtatcagagcatc 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 ttcttatgggatggtttggtgttgtattcaaaggagacatatctcatgtatcagagcatc 655
Query: 506 tagccatagcaataacgactggttacttagggagccttacaactttcagtggttggaatc 565
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 656 tagccatagcaataacgactggttacttagggagccttacaactttcagtggtgggaatc 715
Query: 566 agggtatgctgcaactcagtgtttccggccactggg-tttactcttcacttggctttctt 624
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 716 agggtatgctgcaactcagtgtttccggccactgggttttactcttcacttggctttctt 775
Query: 625 ataggtttttctcttgttgtcatt 648
||||||||||||||||||||||||
Sbjct: 776 ataggtttttctcttgttgtcatt 799
Score = 153 bits (77), Expect = 3e-36
Identities = 83/85 (97%)
Strand = Plus / Plus
Query: 1 atgtcaagtcatataagccatcacacagataacaatgatgatgctgaatctggtagtgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 atgtcaagtcatataagccatcacacagataacaatgatgatgctgaatctggtagtgtt 183
Query: 61 tcagaggctggggacattggggacc 85
||||||||||| |||||||| ||||
Sbjct: 184 tcagaggctggagacattggtgacc 208
>gnl|LJGI|TC81972 similar to UniRef100_A7NV85 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 888
Score = 1047 bits (528), Expect = 0.0
Identities = 528/528 (100%)
Strand = Plus / Plus
Query: 86 agagcaacagttttcgtttgtcttttgacaacagatcagaaaatggagctgtttctactc 145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40 agagcaacagttttcgtttgtcttttgacaacagatcagaaaatggagctgtttctactc 99
Query: 146 tcattcaagatgggaacagattgcagcccaattcctctgttatgcctttgcaaattgagc 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 tcattcaagatgggaacagattgcagcccaattcctctgttatgcctttgcaaattgagc 159
Query: 206 tcacatcaccactttctaccgatgcagttttgatttctgaagaaggtgcaaaggatgagc 265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 tcacatcaccactttctaccgatgcagttttgatttctgaagaaggtgcaaaggatgagc 219
Query: 266 ataatggtttgccagagtggctggactatatttcatgtatggctcttttagctgttttcg 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 ataatggtttgccagagtggctggactatatttcatgtatggctcttttagctgttttcg 279
Query: 326 gaattcttggggttctaacaagatatttactgcaaaagttatttggccctggggttgcca 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 gaattcttggggttctaacaagatatttactgcaaaagttatttggccctggggttgcca 339
Query: 386 atgtgacaagcgaccaaactattctttaccctgaccttccttctaatgtggttggttcat 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 atgtgacaagcgaccaaactattctttaccctgaccttccttctaatgtggttggttcat 399
Query: 446 ttcttatgggatggtttggtgttgtattcaaaggagacatatctcatgtatcagagcatc 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 ttcttatgggatggtttggtgttgtattcaaaggagacatatctcatgtatcagagcatc 459
Query: 506 tagccatagcaataacgactggttacttagggagccttacaactttcagtggttggaatc 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 tagccatagcaataacgactggttacttagggagccttacaactttcagtggttggaatc 519
Query: 566 agggtatgctgcaactcagtgtttccggccactgggtttactcttcac 613
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 agggtatgctgcaactcagtgtttccggccactgggtttactcttcac 567